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MTURN (maturin, neural progenitor differentiation regulator homolog)

Identity

Alias_namesC7orf41
chromosome 7 open reading frame 41
maturin, neural progenitor differentiation regulator homolog (Xenopus)
Alias_symbol (synonym)FLJ25903
Ells1
Other alias
HGNC (Hugo) MTURN
LocusID (NCBI) 222166
Atlas_Id 70576
Location 7p14.3  [Link to chromosome band 7p14]
Location_base_pair Starts at 30134936 and ends at 30162765 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ADGRB3 (6q12) / MTURN (7p14.3)DMXL2 (15q21.2) / MTURN (7p14.3)MTURN (7p14.3) / PLEKHA8 (7p14.3)
ZNRF2 (7p14.3) / MTURN (7p14.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 2 ]
  t(7;7)(p14;p14) ZNRF2/MTURN
t(7;7)(p14;p14) MTURN/PLEKHA8

External links

Nomenclature
HGNC (Hugo)MTURN   25457
Cards
Entrez_Gene (NCBI)MTURN  222166  maturin, neural progenitor differentiation regulator homolog
AliasesC7orf41; Ells1
GeneCards (Weizmann)MTURN
Ensembl hg19 (Hinxton)ENSG00000180354 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000180354 [Gene_View]  chr7:30134936-30162765 [Contig_View]  MTURN [Vega]
ICGC DataPortalENSG00000180354
TCGA cBioPortalMTURN
AceView (NCBI)MTURN
Genatlas (Paris)MTURN
WikiGenes222166
SOURCE (Princeton)MTURN
Genetics Home Reference (NIH)MTURN
Genomic and cartography
GoldenPath hg38 (UCSC)MTURN  -     chr7:30134936-30162765 +  7p14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MTURN  -     7p14.3   [Description]    (hg19-Feb_2009)
EnsemblMTURN - 7p14.3 [CytoView hg19]  MTURN - 7p14.3 [CytoView hg38]
Mapping of homologs : NCBIMTURN [Mapview hg19]  MTURN [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK055466 AK096533 AK294982 AL834391 AY054121
RefSeq transcript (Entrez)NM_152793
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MTURN
Cluster EST : UnigeneHs.200100 [ NCBI ]
CGAP (NCI)Hs.200100
Alternative Splicing GalleryENSG00000180354
Gene ExpressionMTURN [ NCBI-GEO ]   MTURN [ EBI - ARRAY_EXPRESS ]   MTURN [ SEEK ]   MTURN [ MEM ]
Gene Expression Viewer (FireBrowse)MTURN [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)222166
GTEX Portal (Tissue expression)MTURN
Human Protein AtlasENSG00000180354-MTURN [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N3F0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N3F0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N3F0
Splice isoforms : SwissVarQ8N3F0
PhosPhoSitePlusQ8N3F0
Domains : Interpro (EBI)DUF4581   
Domain families : Pfam (Sanger)DUF4581 (PF15167)   
Domain families : Pfam (NCBI)pfam15167   
Conserved Domain (NCBI)MTURN
DMDM Disease mutations222166
Blocks (Seattle)MTURN
SuperfamilyQ8N3F0
Human Protein Atlas [tissue]ENSG00000180354-MTURN [tissue]
Peptide AtlasQ8N3F0
HPRD07635
IPIIPI00166546   IPI00853183   IPI00168785   IPI00852945   IPI00916419   
Protein Interaction databases
DIP (DOE-UCLA)Q8N3F0
IntAct (EBI)Q8N3F0
FunCoupENSG00000180354
BioGRIDMTURN
STRING (EMBL)MTURN
ZODIACMTURN
Ontologies - Pathways
QuickGOQ8N3F0
Ontology : AmiGOmulticellular organism development  
Ontology : EGO-EBImulticellular organism development  
NDEx NetworkMTURN
Atlas of Cancer Signalling NetworkMTURN
Wikipedia pathwaysMTURN
Orthology - Evolution
OrthoDB222166
GeneTree (enSembl)ENSG00000180354
Phylogenetic Trees/Animal Genes : TreeFamMTURN
HOVERGENQ8N3F0
HOGENOMQ8N3F0
Homologs : HomoloGeneMTURN
Homology/Alignments : Family Browser (UCSC)MTURN
Gene fusions - Rearrangements
Fusion : QuiverMTURN
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMTURN [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MTURN
dbVarMTURN
ClinVarMTURN
1000_GenomesMTURN 
Exome Variant ServerMTURN
ExAC (Exome Aggregation Consortium)ENSG00000180354
GNOMAD BrowserENSG00000180354
Genetic variants : HAPMAP222166
Genomic Variants (DGV)MTURN [DGVbeta]
DECIPHERMTURN [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMTURN 
Mutations
ICGC Data PortalMTURN 
TCGA Data PortalMTURN 
Broad Tumor PortalMTURN
OASIS PortalMTURN [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMTURN
BioMutasearch MTURN
DgiDB (Drug Gene Interaction Database)MTURN
DoCM (Curated mutations)MTURN (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MTURN (select a term)
intoGenMTURN
Cancer3DMTURN(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETMTURN
MedgenMTURN
Genetic Testing Registry MTURN
NextProtQ8N3F0 [Medical]
TSGene222166
GENETestsMTURN
Target ValidationMTURN
Huge Navigator MTURN [HugePedia]
snp3D : Map Gene to Disease222166
BioCentury BCIQMTURN
ClinGenMTURN
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD222166
Chemical/Pharm GKB GenePA147358571
Clinical trialMTURN
Miscellaneous
canSAR (ICR)MTURN (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMTURN
EVEXMTURN
GoPubMedMTURN
iHOPMTURN
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Feb 23 18:43:59 CET 2018
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