MUC1 (mucin 1, cell surface associated)

Identity

Other names	CD227
	EMA
	H23AG
	MAM6
	PEM
	PEMT
	PUM
HGNC	MUC1
Location	1q22
Location_base_pair	Starts at 153424924 and ends at 153429324 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	MUC1   7508
Entrez_Gene	MUC1  4582  mucin 1, cell surface associated
	Cards
GeneCards	MUC1
Ensembl	MUC1 [Search_View]   ENSG00000185499 [Gene_View]
Genatlas	MUC1
GeneLynx	MUC1
eGenome	MUC1
euGene	4582
	Genomic and cartography
GoldenPath	MUC1  -  1q22   chr1:153424924-153429324 -  1q22   [Description]    (hg18-March_2006)
Ensembl	MUC1 - 1q22 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	MUC1
	Gene and transcription
Genbank	AF125525 [ ENTREZ ]
Genbank	AF348143 [ ENTREZ ]
Genbank	AY327582 [ ENTREZ ]
Genbank	AY327583 [ ENTREZ ]
Genbank	AY327584 [ ENTREZ ]
RefSeq	NM_001018016 [ SRS ]    NM_001018016 [ ENTREZ ]
RefSeq	NM_001018017 [ SRS ]    NM_001018017 [ ENTREZ ]
RefSeq	NM_001044390 [ SRS ]    NM_001044390 [ ENTREZ ]
RefSeq	NM_001044391 [ SRS ]    NM_001044391 [ ENTREZ ]
RefSeq	NM_001044392 [ SRS ]    NM_001044392 [ ENTREZ ]
RefSeq	NM_001044393 [ SRS ]    NM_001044393 [ ENTREZ ]
RefSeq	NM_002456 [ SRS ]    NM_002456 [ ENTREZ ]
RefSeq	AC_000044 [ SRS ]    AC_000044 [ ENTREZ ]
RefSeq	AC_000133 [ SRS ]    AC_000133 [ ENTREZ ]
RefSeq	NC_000001 [ SRS ]    NC_000001 [ ENTREZ ]
RefSeq	NT_004487 [ SRS ]    NT_004487 [ ENTREZ ]
RefSeq	NW_001838531 [ SRS ]    NW_001838531 [ ENTREZ ]
RefSeq	NW_925683 [ SRS ]    NW_925683 [ ENTREZ ]
AceView	MUC1 AceView - NCBI
Unigene	Hs.89603 [ SRS ]    Hs.89603 [ NCBI ]     HS89603 [ spliceNest ]
	Protein : pattern, domain, 3D structure
SwissProt	P15941 [ SRS]    P15941 [ EXPASY ]     P15941 [ INTERPRO ]     P15941 [ UNIPROT ]
Prosite	PS50024 SEA [ SRS ]    PS50024 SEA [ Expasy ]
Interpro	IPR000082 SEA [ SRS ]    IPR000082 SEA [ EBI ]
CluSTr	P15941
Pfam	PF01390 SEA [ SRS ]    PF01390 SEA [ Sanger ]    pfam01390 [ NCBI-CDD ]
Smart	SM00200 SEA [EMBL]
Prodom	PD003992 XGLTT_domain[INRA-Toulouse]
Prodom	P15941 MUC1_HUMAN [ Domain structure ]   P15941 MUC1_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	P15941
PDB	2ACM [ SRS ]    2ACM [ PdbSum ],   2ACM [ IMB ]   2ACM [ RSDB ]
HPRD	01152
	Protein Interaction databases
DIP	P15941
IntAct	P15941
	Polymorphism : SNP, mutations, diseases
OMIM	158340    [ map ]
GENECLINICS	158340
SNP	MUC1 [dbSNP-NCBI]
SNP	NM_001018016 [SNP-NCI]
SNP	NM_001018017 [SNP-NCI]
SNP	NM_001044390 [SNP-NCI]
SNP	NM_001044391 [SNP-NCI]
SNP	NM_001044392 [SNP-NCI]
SNP	NM_001044393 [SNP-NCI]
SNP	NM_002456 [SNP-NCI]
SNP	MUC1 [GeneSNPs - Utah]  MUC1] [HGBASE - SRS]
HAPMAP	MUC1 [HAPMAP]
COSMIC	MUC1 [Somatic mutation (COSMIC-CGP-Sanger)]
TICdb	hormone [Translocation breakpoints In Cancer]
HGMD	MUC1
	General knowledge
Family Browser	MUC1 [UCSC Family Browser]
SOURCE	NM_001018016
SOURCE	NM_001018017
SOURCE	NM_001044390
SOURCE	NM_001044391
SOURCE	NM_001044392
SOURCE	NM_001044393
SOURCE	NM_002456
SMD	Hs.89603
SAGE	Hs.89603
GO	hormone activity [Amigo]  hormone activity
GO	extracellular region [Amigo]  extracellular region
GO	nucleus [Amigo]  nucleus
GO	cytoplasm [Amigo]  cytoplasm
GO	integral to plasma membrane [Amigo]  integral to plasma membrane
GO	membrane [Amigo]  membrane
GO	apical plasma membrane [Amigo]  apical plasma membrane
PubGene	MUC1
TreeFam	MUC1
CTD	4582 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	MUC1 Related clones (RZPD - Berlin)
	PubMed
PubMed	222 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 18 14:51:28 2008