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MUC15 (mucin 15, cell surface associated)

Identity

Other aliasMUC-15
PAS3
PASIII
HGNC (Hugo) MUC15
LocusID (NCBI) 143662
Atlas_Id 51057
Location 11p14.2  [Link to chromosome band 11p14]
Location_base_pair Starts at 26559032 and ends at 26572268 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MUC15   14956
Cards
Entrez_Gene (NCBI)MUC15  143662  mucin 15, cell surface associated
AliasesMUC-15; PAS3; PASIII
GeneCards (Weizmann)MUC15
Ensembl hg19 (Hinxton)ENSG00000169550 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000169550 [Gene_View]  chr11:26559032-26572268 [Contig_View]  MUC15 [Vega]
ICGC DataPortalENSG00000169550
TCGA cBioPortalMUC15
AceView (NCBI)MUC15
Genatlas (Paris)MUC15
WikiGenes143662
SOURCE (Princeton)MUC15
Genetics Home Reference (NIH)MUC15
Genomic and cartography
GoldenPath hg38 (UCSC)MUC15  -     chr11:26559032-26572268 -  11p14.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MUC15  -     11p14.2   [Description]    (hg19-Feb_2009)
EnsemblMUC15 - 11p14.2 [CytoView hg19]  MUC15 - 11p14.2 [CytoView hg38]
Mapping of homologs : NCBIMUC15 [Mapview hg19]  MUC15 [Mapview hg38]
OMIM608566   
Gene and transcription
Genbank (Entrez)AJ417818 AJ507429 AK026790 AK128337 AY358668
RefSeq transcript (Entrez)NM_001135091 NM_001135092 NM_145650
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MUC15
Cluster EST : UnigeneHs.407152 [ NCBI ]
CGAP (NCI)Hs.407152
Alternative Splicing GalleryENSG00000169550
Gene ExpressionMUC15 [ NCBI-GEO ]   MUC15 [ EBI - ARRAY_EXPRESS ]   MUC15 [ SEEK ]   MUC15 [ MEM ]
Gene Expression Viewer (FireBrowse)MUC15 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)143662
GTEX Portal (Tissue expression)MUC15
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N387   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N387  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N387
Splice isoforms : SwissVarQ8N387
PhosPhoSitePlusQ8N387
Domains : Interpro (EBI)Mucin-15   
Domain families : Pfam (Sanger)Mucin15 (PF15672)   
Domain families : Pfam (NCBI)pfam15672   
Conserved Domain (NCBI)MUC15
DMDM Disease mutations143662
Blocks (Seattle)MUC15
SuperfamilyQ8N387
Human Protein AtlasENSG00000169550
Peptide AtlasQ8N387
HPRD16349
IPIIPI00103231   IPI00913880   IPI00429324   
Protein Interaction databases
DIP (DOE-UCLA)Q8N387
IntAct (EBI)Q8N387
FunCoupENSG00000169550
BioGRIDMUC15
STRING (EMBL)MUC15
ZODIACMUC15
Ontologies - Pathways
QuickGOQ8N387
Ontology : AmiGOstimulatory C-type lectin receptor signaling pathway  extracellular region  Golgi lumen  plasma membrane  integral component of membrane  O-glycan processing  
Ontology : EGO-EBIstimulatory C-type lectin receptor signaling pathway  extracellular region  Golgi lumen  plasma membrane  integral component of membrane  O-glycan processing  
NDEx NetworkMUC15
Atlas of Cancer Signalling NetworkMUC15
Wikipedia pathwaysMUC15
Orthology - Evolution
OrthoDB143662
GeneTree (enSembl)ENSG00000169550
Phylogenetic Trees/Animal Genes : TreeFamMUC15
HOVERGENQ8N387
HOGENOMQ8N387
Homologs : HomoloGeneMUC15
Homology/Alignments : Family Browser (UCSC)MUC15
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMUC15 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MUC15
dbVarMUC15
ClinVarMUC15
1000_GenomesMUC15 
Exome Variant ServerMUC15
ExAC (Exome Aggregation Consortium)MUC15 (select the gene name)
Genetic variants : HAPMAP143662
Genomic Variants (DGV)MUC15 [DGVbeta]
DECIPHERMUC15 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMUC15 
Mutations
ICGC Data PortalMUC15 
TCGA Data PortalMUC15 
Broad Tumor PortalMUC15
OASIS PortalMUC15 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMUC15  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMUC15
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MUC15
DgiDB (Drug Gene Interaction Database)MUC15
DoCM (Curated mutations)MUC15 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MUC15 (select a term)
intoGenMUC15
Cancer3DMUC15(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608566   
Orphanet
MedgenMUC15
Genetic Testing Registry MUC15
NextProtQ8N387 [Medical]
TSGene143662
GENETestsMUC15
Target ValidationMUC15
Huge Navigator MUC15 [HugePedia]
snp3D : Map Gene to Disease143662
BioCentury BCIQMUC15
ClinGenMUC15
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD143662
Chemical/Pharm GKB GenePA31313
Clinical trialMUC15
Miscellaneous
canSAR (ICR)MUC15 (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMUC15
EVEXMUC15
GoPubMedMUC15
iHOPMUC15
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:45:38 CEST 2017

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