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MUC19 (mucin 19, oligomeric)

Identity

Alias_symbol (synonym)FLJ35746
Other aliasMUC-19
HGNC (Hugo) MUC19
LocusID (NCBI) 283463
Atlas_Id 52057
Location 12q12  [Link to chromosome band 12q12]
Location_base_pair Starts at 40393394 and ends at 40570755 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MUC19   14362
Cards
Entrez_Gene (NCBI)MUC19  283463  mucin 19, oligomeric
AliasesMUC-19
GeneCards (Weizmann)MUC19
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr12:40393394-40570755 [Contig_View]  MUC19 [Vega]
TCGA cBioPortalMUC19
AceView (NCBI)MUC19
Genatlas (Paris)MUC19
WikiGenes283463
SOURCE (Princeton)MUC19
Genetics Home Reference (NIH)MUC19
Genomic and cartography
GoldenPath hg38 (UCSC)MUC19  -     chr12:40393394-40570755 +  12q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MUC19  -     12q12   [Description]    (hg19-Feb_2009)
EnsemblMUC19 - 12q12 [CytoView hg19]  MUC19 - 12q12 [CytoView hg38]
Mapping of homologs : NCBIMUC19 [Mapview hg19]  MUC19 [Mapview hg38]
OMIM612170   
Gene and transcription
Genbank (Entrez)AK093065 AY236870 BG718209 CR749517 DV080669
RefSeq transcript (Entrez)NM_173600
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MUC19
Cluster EST : UnigeneHs.632712 [ NCBI ]
CGAP (NCI)Hs.632712
Gene ExpressionMUC19 [ NCBI-GEO ]   MUC19 [ EBI - ARRAY_EXPRESS ]   MUC19 [ SEEK ]   MUC19 [ MEM ]
Gene Expression Viewer (FireBrowse)MUC19 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)283463
GTEX Portal (Tissue expression)MUC19
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7Z5P9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7Z5P9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7Z5P9
Splice isoforms : SwissVarQ7Z5P9
PhosPhoSitePlusQ7Z5P9
Domaine pattern : Prosite (Expaxy)CTCK_1 (PS01185)    CTCK_2 (PS01225)    VWFC_2 (PS50184)    VWFD (PS51233)   
Domains : Interpro (EBI)Cys_knot_C    TIL_dom    Unchr_dom_Cys-rich    VWF_dom    VWF_type-D   
Domain families : Pfam (Sanger)C8 (PF08742)    TIL (PF01826)    VWD (PF00094)   
Domain families : Pfam (NCBI)pfam08742    pfam01826    pfam00094   
Domain families : Smart (EMBL)C8 (SM00832)  CT (SM00041)  VWC (SM00214)  VWC_out (SM00215)  VWD (SM00216)  
Conserved Domain (NCBI)MUC19
DMDM Disease mutations283463
Blocks (Seattle)MUC19
SuperfamilyQ7Z5P9
Peptide AtlasQ7Z5P9
IPIIPI00896516   IPI00829833   IPI00973322   IPI00787305   IPI01014674   
Protein Interaction databases
DIP (DOE-UCLA)Q7Z5P9
IntAct (EBI)Q7Z5P9
BioGRIDMUC19
STRING (EMBL)MUC19
ZODIACMUC19
Ontologies - Pathways
QuickGOQ7Z5P9
Ontology : AmiGOstimulatory C-type lectin receptor signaling pathway  Golgi lumen  plasma membrane  O-glycan processing  extracellular exosome  
Ontology : EGO-EBIstimulatory C-type lectin receptor signaling pathway  Golgi lumen  plasma membrane  O-glycan processing  extracellular exosome  
NDEx NetworkMUC19
Atlas of Cancer Signalling NetworkMUC19
Wikipedia pathwaysMUC19
Orthology - Evolution
OrthoDB283463
Phylogenetic Trees/Animal Genes : TreeFamMUC19
HOVERGENQ7Z5P9
HOGENOMQ7Z5P9
Homologs : HomoloGeneMUC19
Homology/Alignments : Family Browser (UCSC)MUC19
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMUC19 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MUC19
dbVarMUC19
ClinVarMUC19
1000_GenomesMUC19 
Exome Variant ServerMUC19
ExAC (Exome Aggregation Consortium)MUC19 (select the gene name)
Genetic variants : HAPMAP283463
Genomic Variants (DGV)MUC19 [DGVbeta]
DECIPHERMUC19 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMUC19 
Mutations
ICGC Data PortalMUC19 
TCGA Data PortalMUC19 
Broad Tumor PortalMUC19
OASIS PortalMUC19 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMUC19  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMUC19
BioMutasearch MUC19
DgiDB (Drug Gene Interaction Database)MUC19
DoCM (Curated mutations)MUC19 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MUC19 (select a term)
intoGenMUC19
Cancer3DMUC19(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612170   
Orphanet
MedgenMUC19
Genetic Testing Registry MUC19
NextProtQ7Z5P9 [Medical]
TSGene283463
GENETestsMUC19
Target ValidationMUC19
Huge Navigator MUC19 [HugePedia]
snp3D : Map Gene to Disease283463
BioCentury BCIQMUC19
ClinGenMUC19
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283463
Chemical/Pharm GKB GenePA134898689
Clinical trialMUC19
Miscellaneous
canSAR (ICR)MUC19 (select the gene name)
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMUC19
EVEXMUC19
GoPubMedMUC19
iHOPMUC19
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:45:38 CEST 2017

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