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MUC3B (mucin 3B, cell surface associated)

Identity

Alias_namesmucin 3B
Other aliasMUC3
MUC3A
HGNC (Hugo) MUC3B
LocusID (NCBI) 57876
Atlas_Id 70583
Location 7q22.1  [Link to chromosome band 7q22]
Location_base_pair Starts at 100959118 and ends at 100968346 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)MUC3B   13384
Cards
Entrez_Gene (NCBI)MUC3B  57876  mucin 3B, cell surface associated
AliasesMUC3; MUC3A
GeneCards (Weizmann)MUC3B
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:100959118-100968346 [Contig_View]  MUC3B [Vega]
TCGA cBioPortalMUC3B
AceView (NCBI)MUC3B
Genatlas (Paris)MUC3B
WikiGenes57876
SOURCE (Princeton)MUC3B
Genetics Home Reference (NIH)MUC3B
Genomic and cartography
GoldenPath hg38 (UCSC)MUC3B  -     chr7:100959118-100968346 +  7q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MUC3B  -     7q22.1   [Description]    (hg19-Feb_2009)
EnsemblMUC3B - 7q22.1 [CytoView hg19]  MUC3B - 7q22.1 [CytoView hg38]
Mapping of homologs : NCBIMUC3B [Mapview hg19]  MUC3B [Mapview hg38]
OMIM605633   
Gene and transcription
Genbank (Entrez)AB038783 AY307931
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MUC3B
Cluster EST : UnigeneHs.744422 [ NCBI ]
CGAP (NCI)Hs.744422
Gene ExpressionMUC3B [ NCBI-GEO ]   MUC3B [ EBI - ARRAY_EXPRESS ]   MUC3B [ SEEK ]   MUC3B [ MEM ]
Gene Expression Viewer (FireBrowse)MUC3B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57876
GTEX Portal (Tissue expression)MUC3B
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H195   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H195  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H195
Splice isoforms : SwissVarQ9H195
PhosPhoSitePlusQ9H195
Domaine pattern : Prosite (Expaxy)EGF_1 (PS00022)    EGF_2 (PS01186)    EGF_3 (PS50026)    SEA (PS50024)   
Domains : Interpro (EBI)EGF-like_CS    EGF-like_dom    SEA_dom   
Domain families : Pfam (Sanger)SEA (PF01390)   
Domain families : Pfam (NCBI)pfam01390   
Domain families : Smart (EMBL)EGF (SM00181)  SEA (SM00200)  
Conserved Domain (NCBI)MUC3B
DMDM Disease mutations57876
Blocks (Seattle)MUC3B
SuperfamilyQ9H195
Peptide AtlasQ9H195
IPIIPI00787577   IPI00914008   
Protein Interaction databases
DIP (DOE-UCLA)Q9H195
IntAct (EBI)Q9H195
BioGRIDMUC3B
STRING (EMBL)MUC3B
ZODIACMUC3B
Ontologies - Pathways
QuickGOQ9H195
Ontology : AmiGOstimulatory C-type lectin receptor signaling pathway  Golgi lumen  plasma membrane  integral component of membrane  O-glycan processing  
Ontology : EGO-EBIstimulatory C-type lectin receptor signaling pathway  Golgi lumen  plasma membrane  integral component of membrane  O-glycan processing  
NDEx NetworkMUC3B
Atlas of Cancer Signalling NetworkMUC3B
Wikipedia pathwaysMUC3B
Orthology - Evolution
OrthoDB57876
Phylogenetic Trees/Animal Genes : TreeFamMUC3B
HOVERGENQ9H195
HOGENOMQ9H195
Homologs : HomoloGeneMUC3B
Homology/Alignments : Family Browser (UCSC)MUC3B
Gene fusions - Rearrangements
Fusion: Tumor Portal MUC3B
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMUC3B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MUC3B
dbVarMUC3B
ClinVarMUC3B
1000_GenomesMUC3B 
Exome Variant ServerMUC3B
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP57876
Genomic Variants (DGV)MUC3B [DGVbeta]
DECIPHERMUC3B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMUC3B 
Mutations
ICGC Data PortalMUC3B 
TCGA Data PortalMUC3B 
Broad Tumor PortalMUC3B
OASIS PortalMUC3B [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMUC3B
BioMutasearch MUC3B
DgiDB (Drug Gene Interaction Database)MUC3B
DoCM (Curated mutations)MUC3B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MUC3B (select a term)
intoGenMUC3B
Cancer3DMUC3B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605633   
Orphanet
MedgenMUC3B
Genetic Testing Registry MUC3B
NextProtQ9H195 [Medical]
TSGene57876
GENETestsMUC3B
Target ValidationMUC3B
Huge Navigator MUC3B [HugePedia]
snp3D : Map Gene to Disease57876
BioCentury BCIQMUC3B
ClinGenMUC3B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57876
Chemical/Pharm GKB GenePA31318
Clinical trialMUC3B
Miscellaneous
canSAR (ICR)MUC3B (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMUC3B
EVEXMUC3B
GoPubMedMUC3B
iHOPMUC3B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Nov 9 12:18:15 CET 2017

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