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MUC5B-AS1 (MUC5B antisense RNA 1)

Identity

Alias (NCBI)-
HGNC (Hugo) MUC5B-AS1
LocusID (NCBI) 112577518
Atlas_Id 80371
Location 11p15.5  [Link to chromosome band 11p15]
Location_base_pair Starts at 1242261 and ends at 1249676 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

Nomenclature
HGNC (Hugo)MUC5B-AS1   53936
Cards
Entrez_Gene (NCBI)MUC5B-AS1    MUC5B antisense RNA 1
Aliases
GeneCards (Weizmann)MUC5B-AS1
Ensembl hg19 (Hinxton)ENSG00000255177 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000255177 [Gene_View]  ENSG00000255177 [Sequence]  chr11:1242261-1249676 [Contig_View]  MUC5B-AS1 [Vega]
ICGC DataPortalENSG00000255177
TCGA cBioPortalMUC5B-AS1
AceView (NCBI)MUC5B-AS1
Genatlas (Paris)MUC5B-AS1
SOURCE (Princeton)MUC5B-AS1
Genetics Home Reference (NIH)MUC5B-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)MUC5B-AS1  -     chr11:1242261-1249676 -  11p15.5   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MUC5B-AS1  -     11p15.5   [Description]    (hg19-Feb_2009)
GoldenPathMUC5B-AS1 - 11p15.5 [CytoView hg19]  MUC5B-AS1 - 11p15.5 [CytoView hg38]
ImmunoBaseENSG00000255177
genome Data Viewer NCBIMUC5B-AS1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MUC5B-AS1
Alternative Splicing GalleryENSG00000255177
Gene ExpressionMUC5B-AS1 [ NCBI-GEO ]   MUC5B-AS1 [ EBI - ARRAY_EXPRESS ]   MUC5B-AS1 [ SEEK ]   MUC5B-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)MUC5B-AS1 [ Firebrowse - Broad ]
GenevisibleExpression of MUC5B-AS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)112577518
GTEX Portal (Tissue expression)MUC5B-AS1
Human Protein AtlasENSG00000255177-MUC5B-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MUC5B-AS1
Blocks (Seattle)MUC5B-AS1
Human Protein Atlas [tissue]ENSG00000255177-MUC5B-AS1 [tissue]
Protein Interaction databases
BioGRIDMUC5B-AS1
STRING (EMBL)MUC5B-AS1
ZODIACMUC5B-AS1
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMUC5B-AS1
EVEXMUC5B-AS1
GoPubMedMUC5B-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Dec 5 17:18:25 CET 2020

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