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MUC7 (mucin 7, secreted)

Identity

Alias_namesmucin 7
Alias_symbol (synonym)FLJ27047
MG2
Other alias
HGNC (Hugo) MUC7
LocusID (NCBI) 4589
Atlas_Id 52448
Location 4q13.3  [Link to chromosome band 4q13]
Location_base_pair Starts at 70430492 and ends at 70482997 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CUL9 (6p21.1) / MUC7 (4q13.3)MALAT1 (11q13.1) / MUC7 (4q13.3)MOB1B (4q13.3) / MUC7 (4q13.3)
SEC31A (4q21.22) / MUC7 (4q13.3)MOBKL1A MUC7 4q13.3SEC31A 4q21.22 / MUC7 4q13.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MUC7   7518
Cards
Entrez_Gene (NCBI)MUC7  4589  mucin 7, secreted
AliasesMG2
GeneCards (Weizmann)MUC7
Ensembl hg19 (Hinxton)ENSG00000171195 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000171195 [Gene_View]  chr4:70430492-70482997 [Contig_View]  MUC7 [Vega]
ICGC DataPortalENSG00000171195
TCGA cBioPortalMUC7
AceView (NCBI)MUC7
Genatlas (Paris)MUC7
WikiGenes4589
SOURCE (Princeton)MUC7
Genetics Home Reference (NIH)MUC7
Genomic and cartography
GoldenPath hg38 (UCSC)MUC7  -     chr4:70430492-70482997 +  4q13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MUC7  -     4q13.3   [Description]    (hg19-Feb_2009)
EnsemblMUC7 - 4q13.3 [CytoView hg19]  MUC7 - 4q13.3 [CytoView hg38]
Mapping of homologs : NCBIMUC7 [Mapview hg19]  MUC7 [Mapview hg38]
OMIM158375   600807   
Gene and transcription
Genbank (Entrez)AK093828 AK312855 BC025688 BX537739 BX647190
RefSeq transcript (Entrez)NM_001145006 NM_001145007 NM_152291
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MUC7
Cluster EST : UnigeneHs.631946 [ NCBI ]
CGAP (NCI)Hs.631946
Alternative Splicing GalleryENSG00000171195
Gene ExpressionMUC7 [ NCBI-GEO ]   MUC7 [ EBI - ARRAY_EXPRESS ]   MUC7 [ SEEK ]   MUC7 [ MEM ]
Gene Expression Viewer (FireBrowse)MUC7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4589
GTEX Portal (Tissue expression)MUC7
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TAX7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TAX7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TAX7
Splice isoforms : SwissVarQ8TAX7
PhosPhoSitePlusQ8TAX7
Domains : Interpro (EBI)MUC7   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MUC7
DMDM Disease mutations4589
Blocks (Seattle)MUC7
SuperfamilyQ8TAX7
Human Protein AtlasENSG00000171195
Peptide AtlasQ8TAX7
HPRD11759
IPIIPI00152154   IPI00965100   
Protein Interaction databases
DIP (DOE-UCLA)Q8TAX7
IntAct (EBI)Q8TAX7
FunCoupENSG00000171195
BioGRIDMUC7
STRING (EMBL)MUC7
ZODIACMUC7
Ontologies - Pathways
QuickGOQ8TAX7
Ontology : AmiGOstimulatory C-type lectin receptor signaling pathway  protein binding  Golgi lumen  plasma membrane  O-glycan processing  extracellular exosome  
Ontology : EGO-EBIstimulatory C-type lectin receptor signaling pathway  protein binding  Golgi lumen  plasma membrane  O-glycan processing  extracellular exosome  
Pathways : KEGGSalivary secretion   
NDEx NetworkMUC7
Atlas of Cancer Signalling NetworkMUC7
Wikipedia pathwaysMUC7
Orthology - Evolution
OrthoDB4589
GeneTree (enSembl)ENSG00000171195
Phylogenetic Trees/Animal Genes : TreeFamMUC7
HOVERGENQ8TAX7
HOGENOMQ8TAX7
Homologs : HomoloGeneMUC7
Homology/Alignments : Family Browser (UCSC)MUC7
Gene fusions - Rearrangements
Fusion : MitelmanMOB1B/MUC7 [4q13.3/4q13.3]  [t(4;4)(q13;q13)]  
Fusion : MitelmanSEC31A/MUC7 [4q21.22/4q13.3]  [t(4;4)(q13;q21)]  
Fusion: TCGAMOBKL1A MUC7 4q13.3 OV
Fusion: TCGASEC31A 4q21.22 MUC7 4q13.3 BRCA
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMUC7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MUC7
dbVarMUC7
ClinVarMUC7
1000_GenomesMUC7 
Exome Variant ServerMUC7
ExAC (Exome Aggregation Consortium)MUC7 (select the gene name)
Genetic variants : HAPMAP4589
Genomic Variants (DGV)MUC7 [DGVbeta]
DECIPHERMUC7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMUC7 
Mutations
ICGC Data PortalMUC7 
TCGA Data PortalMUC7 
Broad Tumor PortalMUC7
OASIS PortalMUC7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMUC7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMUC7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MUC7
DgiDB (Drug Gene Interaction Database)MUC7
DoCM (Curated mutations)MUC7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MUC7 (select a term)
intoGenMUC7
Cancer3DMUC7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM158375    600807   
Orphanet
MedgenMUC7
Genetic Testing Registry MUC7
NextProtQ8TAX7 [Medical]
TSGene4589
GENETestsMUC7
Huge Navigator MUC7 [HugePedia]
snp3D : Map Gene to Disease4589
BioCentury BCIQMUC7
ClinGenMUC7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4589
Chemical/Pharm GKB GenePA31323
Clinical trialMUC7
Miscellaneous
canSAR (ICR)MUC7 (select the gene name)
Probes
Litterature
PubMed46 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMUC7
EVEXMUC7
GoPubMedMUC7
iHOPMUC7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:27:32 CEST 2017

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