Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MUCL3 (mucin like 3)

Identity

Other aliasC6orf37
DPCR1
PBLT
HGNC (Hugo) MUCL3
LocusID (NCBI) 135656
Atlas_Id 57501
Location 6p21.33  [Link to chromosome band 6p21]
Location_base_pair Starts at 30941000 and ends at 30954221 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)MUCL3   21666
Cards
Entrez_Gene (NCBI)MUCL3  135656  mucin like 3
AliasesC6orf37; DPCR1; PBLT
GeneCards (Weizmann)MUCL3
Ensembl hg19 (Hinxton)ENSG00000168631 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000168631 [Gene_View]  ENSG00000168631 [Sequence]  chr6:30941000-30954221 [Contig_View]  MUCL3 [Vega]
ICGC DataPortalENSG00000168631
TCGA cBioPortalMUCL3
AceView (NCBI)MUCL3
Genatlas (Paris)MUCL3
WikiGenes135656
SOURCE (Princeton)MUCL3
Genetics Home Reference (NIH)MUCL3
Genomic and cartography
GoldenPath hg38 (UCSC)MUCL3  -     chr6:30941000-30954221 +  6p21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MUCL3  -     6p21.33   [Description]    (hg19-Feb_2009)
EnsemblMUCL3 - 6p21.33 [CytoView hg19]  MUCL3 - 6p21.33 [CytoView hg38]
Mapping of homologs : NCBIMUCL3 [Mapview hg19]  MUCL3 [Mapview hg38]
OMIM613928   
Gene and transcription
Genbank (Entrez)AB064272 AL833738 BC069477 BC101661 BC101663
RefSeq transcript (Entrez)NM_080870
RefSeq genomic (Entrez)NC_000006 NT_113891 NT_167245 NT_167247 NT_167248
Consensus coding sequences : CCDS (NCBI)MUCL3
Cluster EST : UnigeneHs.631993 [ NCBI ]
CGAP (NCI)Hs.631993
Alternative Splicing GalleryENSG00000168631
Gene ExpressionMUCL3 [ NCBI-GEO ]   MUCL3 [ EBI - ARRAY_EXPRESS ]   MUCL3 [ SEEK ]   MUCL3 [ MEM ]
Gene Expression Viewer (FireBrowse)MUCL3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)135656
GTEX Portal (Tissue expression)MUCL3
Human Protein AtlasENSG00000168631-MUCL3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ3MIW9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ3MIW9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ3MIW9
Splice isoforms : SwissVarQ3MIW9
PhosPhoSitePlusQ3MIW9
Domains : Interpro (EBI)DPCR1   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MUCL3
DMDM Disease mutations135656
Blocks (Seattle)MUCL3
SuperfamilyQ3MIW9
Human Protein Atlas [tissue]ENSG00000168631-MUCL3 [tissue]
Peptide AtlasQ3MIW9
IPIIPI00885122   IPI00645951   IPI01022009   IPI00142856   IPI00930431   IPI00893470   
Protein Interaction databases
DIP (DOE-UCLA)Q3MIW9
IntAct (EBI)Q3MIW9
FunCoupENSG00000168631
BioGRIDMUCL3
STRING (EMBL)MUCL3
ZODIACMUCL3
Ontologies - Pathways
QuickGOQ3MIW9
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkMUCL3
Atlas of Cancer Signalling NetworkMUCL3
Wikipedia pathwaysMUCL3
Orthology - Evolution
OrthoDB135656
GeneTree (enSembl)ENSG00000168631
Phylogenetic Trees/Animal Genes : TreeFamMUCL3
HOVERGENQ3MIW9
HOGENOMQ3MIW9
Homologs : HomoloGeneMUCL3
Homology/Alignments : Family Browser (UCSC)MUCL3
Gene fusions - Rearrangements
Fusion : QuiverMUCL3
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMUCL3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MUCL3
dbVarMUCL3
ClinVarMUCL3
1000_GenomesMUCL3 
Exome Variant ServerMUCL3
ExAC (Exome Aggregation Consortium)ENSG00000168631
GNOMAD BrowserENSG00000168631
Varsome BrowserMUCL3
Genetic variants : HAPMAP135656
Genomic Variants (DGV)MUCL3 [DGVbeta]
DECIPHERMUCL3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMUCL3 
Mutations
ICGC Data PortalMUCL3 
TCGA Data PortalMUCL3 
Broad Tumor PortalMUCL3
OASIS PortalMUCL3 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMUCL3
BioMutasearch MUCL3
DgiDB (Drug Gene Interaction Database)MUCL3
DoCM (Curated mutations)MUCL3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MUCL3 (select a term)
intoGenMUCL3
Cancer3DMUCL3(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613928   
Orphanet
DisGeNETMUCL3
MedgenMUCL3
Genetic Testing Registry MUCL3
NextProtQ3MIW9 [Medical]
TSGene135656
GENETestsMUCL3
Target ValidationMUCL3
Huge Navigator MUCL3 [HugePedia]
snp3D : Map Gene to Disease135656
BioCentury BCIQMUCL3
ClinGenMUCL3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD135656
Chemical/Pharm GKB GenePA134926573
Clinical trialMUCL3
Miscellaneous
canSAR (ICR)MUCL3 (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMUCL3
EVEXMUCL3
GoPubMedMUCL3
iHOPMUCL3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 6 11:24:20 CET 2018

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