Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MXD3 (MAX dimerization protein 3)

Identity

Alias_symbol (synonym)MAD3
bHLHc13
Other aliasBHLHC13
MYX
HGNC (Hugo) MXD3
LocusID (NCBI) 83463
Atlas_Id 56413
Location 5q35.3  [Link to chromosome band 5q35]
Location_base_pair Starts at 177305500 and ends at 177312291 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ANKH (5p15.2) / MXD3 (5q35.3)LMAN2 (5q35.3) / MXD3 (5q35.3)MXD3 (5q35.3) / EME2 (16p13.3)
MXD3 (5q35.3) / PYCR2 (1q42.12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MXD3   14008
Cards
Entrez_Gene (NCBI)MXD3  83463  MAX dimerization protein 3
AliasesBHLHC13; MAD3; MYX
GeneCards (Weizmann)MXD3
Ensembl hg19 (Hinxton)ENSG00000213347 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000213347 [Gene_View]  chr5:177305500-177312291 [Contig_View]  MXD3 [Vega]
ICGC DataPortalENSG00000213347
TCGA cBioPortalMXD3
AceView (NCBI)MXD3
Genatlas (Paris)MXD3
WikiGenes83463
SOURCE (Princeton)MXD3
Genetics Home Reference (NIH)MXD3
Genomic and cartography
GoldenPath hg38 (UCSC)MXD3  -     chr5:177305500-177312291 -  5q35.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MXD3  -     5q35.3   [Description]    (hg19-Feb_2009)
EnsemblMXD3 - 5q35.3 [CytoView hg19]  MXD3 - 5q35.3 [CytoView hg38]
Mapping of homologs : NCBIMXD3 [Mapview hg19]  MXD3 [Mapview hg38]
OMIM609450   
Gene and transcription
Genbank (Entrez)AF114834 AK057034 AK092842 AK222579 AK303397
RefSeq transcript (Entrez)NM_001142935 NM_031300
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MXD3
Cluster EST : UnigeneHs.743332 [ NCBI ]
CGAP (NCI)Hs.743332
Alternative Splicing GalleryENSG00000213347
Gene ExpressionMXD3 [ NCBI-GEO ]   MXD3 [ EBI - ARRAY_EXPRESS ]   MXD3 [ SEEK ]   MXD3 [ MEM ]
Gene Expression Viewer (FireBrowse)MXD3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)83463
GTEX Portal (Tissue expression)MXD3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BW11   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BW11  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BW11
Splice isoforms : SwissVarQ9BW11
PhosPhoSitePlusQ9BW11
Domaine pattern : Prosite (Expaxy)BHLH (PS50888)   
Domains : Interpro (EBI)bHLH_dom   
Domain families : Pfam (Sanger)HLH (PF00010)   
Domain families : Pfam (NCBI)pfam00010   
Domain families : Smart (EMBL)HLH (SM00353)  
Conserved Domain (NCBI)MXD3
DMDM Disease mutations83463
Blocks (Seattle)MXD3
SuperfamilyQ9BW11
Human Protein AtlasENSG00000213347
Peptide AtlasQ9BW11
HPRD14791
IPIIPI00470624   IPI00795383   IPI00065483   IPI01025147   IPI00385756   IPI00967653   
Protein Interaction databases
DIP (DOE-UCLA)Q9BW11
IntAct (EBI)Q9BW11
FunCoupENSG00000213347
BioGRIDMXD3
STRING (EMBL)MXD3
ZODIACMXD3
Ontologies - Pathways
QuickGOQ9BW11
Ontology : AmiGODNA binding  protein binding  nucleus  transcription, DNA-templated  negative regulation of transcription, DNA-templated  protein dimerization activity  
Ontology : EGO-EBIDNA binding  protein binding  nucleus  transcription, DNA-templated  negative regulation of transcription, DNA-templated  protein dimerization activity  
NDEx NetworkMXD3
Atlas of Cancer Signalling NetworkMXD3
Wikipedia pathwaysMXD3
Orthology - Evolution
OrthoDB83463
GeneTree (enSembl)ENSG00000213347
Phylogenetic Trees/Animal Genes : TreeFamMXD3
HOVERGENQ9BW11
HOGENOMQ9BW11
Homologs : HomoloGeneMXD3
Homology/Alignments : Family Browser (UCSC)MXD3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMXD3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MXD3
dbVarMXD3
ClinVarMXD3
1000_GenomesMXD3 
Exome Variant ServerMXD3
ExAC (Exome Aggregation Consortium)MXD3 (select the gene name)
Genetic variants : HAPMAP83463
Genomic Variants (DGV)MXD3 [DGVbeta]
DECIPHERMXD3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMXD3 
Mutations
ICGC Data PortalMXD3 
TCGA Data PortalMXD3 
Broad Tumor PortalMXD3
OASIS PortalMXD3 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMXD3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MXD3
DgiDB (Drug Gene Interaction Database)MXD3
DoCM (Curated mutations)MXD3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MXD3 (select a term)
intoGenMXD3
Cancer3DMXD3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609450   
Orphanet
MedgenMXD3
Genetic Testing Registry MXD3
NextProtQ9BW11 [Medical]
TSGene83463
GENETestsMXD3
Target ValidationMXD3
Huge Navigator MXD3 [HugePedia]
snp3D : Map Gene to Disease83463
BioCentury BCIQMXD3
ClinGenMXD3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD83463
Chemical/Pharm GKB GenePA134892226
Clinical trialMXD3
Miscellaneous
canSAR (ICR)MXD3 (select the gene name)
Probes
Litterature
PubMed24 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMXD3
EVEXMXD3
GoPubMedMXD3
iHOPMXD3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Aug 1 17:08:25 CEST 2017

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