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MYADM (myeloid associated differentiation marker)

Identity

Other aliasSB135
HGNC (Hugo) MYADM
LocusID (NCBI) 91663
Atlas_Id 70595
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 53869391 and ends at 53876435 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
EXOC7 (17q25.1) / MYADM (19q13.42)INSR (19p13.2) / MYADM (19q13.42)IZUMO1 (19q13.33) / MYADM (19q13.42)
MYADM (19q13.42) / SPIDR (8q11.21)TPSAB1 (16p13.3) / MYADM (19q13.42)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MYADM   7544
Cards
Entrez_Gene (NCBI)MYADM  91663  myeloid associated differentiation marker
AliasesSB135
GeneCards (Weizmann)MYADM
Ensembl hg19 (Hinxton)ENSG00000179820 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000179820 [Gene_View]  chr19:53869391-53876435 [Contig_View]  MYADM [Vega]
ICGC DataPortalENSG00000179820
TCGA cBioPortalMYADM
AceView (NCBI)MYADM
Genatlas (Paris)MYADM
WikiGenes91663
SOURCE (Princeton)MYADM
Genetics Home Reference (NIH)MYADM
Genomic and cartography
GoldenPath hg38 (UCSC)MYADM  -     chr19:53869391-53876435 +  19q13.42   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MYADM  -     19q13.42   [Description]    (hg19-Feb_2009)
EnsemblMYADM - 19q13.42 [CytoView hg19]  MYADM - 19q13.42 [CytoView hg38]
Mapping of homologs : NCBIMYADM [Mapview hg19]  MYADM [Mapview hg38]
OMIM609959   
Gene and transcription
Genbank (Entrez)AF087882 AI074232 AK027693 AK075276 AK093999
RefSeq transcript (Entrez)NM_001020818 NM_001020819 NM_001020820 NM_001020821 NM_001290188 NM_001290189 NM_001290190 NM_001290191 NM_001290192 NM_001290193 NM_001290194 NM_138373
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MYADM
Cluster EST : UnigeneHs.380906 [ NCBI ]
CGAP (NCI)Hs.380906
Alternative Splicing GalleryENSG00000179820
Gene ExpressionMYADM [ NCBI-GEO ]   MYADM [ EBI - ARRAY_EXPRESS ]   MYADM [ SEEK ]   MYADM [ MEM ]
Gene Expression Viewer (FireBrowse)MYADM [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)91663
GTEX Portal (Tissue expression)MYADM
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96S97   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96S97  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96S97
Splice isoforms : SwissVarQ96S97
PhosPhoSitePlusQ96S97
Domaine pattern : Prosite (Expaxy)MARVEL (PS51225)   
Domains : Interpro (EBI)Marvel   
Domain families : Pfam (Sanger)MARVEL (PF01284)   
Domain families : Pfam (NCBI)pfam01284   
Conserved Domain (NCBI)MYADM
DMDM Disease mutations91663
Blocks (Seattle)MYADM
SuperfamilyQ96S97
Human Protein AtlasENSG00000179820
Peptide AtlasQ96S97
HPRD14792
IPIIPI00102685   IPI00910385   IPI00658209   IPI00385137   IPI00657979   IPI00878612   
Protein Interaction databases
DIP (DOE-UCLA)Q96S97
IntAct (EBI)Q96S97
FunCoupENSG00000179820
BioGRIDMYADM
STRING (EMBL)MYADM
ZODIACMYADM
Ontologies - Pathways
QuickGOQ96S97
Ontology : AmiGOruffle  negative regulation of protein phosphorylation  molecular_function  plasma membrane  plasma membrane  cell-cell junction  negative regulation of gene expression  regulation of cell-substrate adhesion  integral component of membrane  positive regulation of cell migration  negative regulation of actin filament polymerization  cortical actin cytoskeleton  membrane raft organization  negative regulation of heterotypic cell-cell adhesion  membrane raft  cell-cell junction maintenance  establishment of endothelial barrier  extracellular exosome  protein targeting to plasma membrane  negative regulation of protein kinase C signaling  positive regulation of substrate adhesion-dependent cell spreading  
Ontology : EGO-EBIruffle  negative regulation of protein phosphorylation  molecular_function  plasma membrane  plasma membrane  cell-cell junction  negative regulation of gene expression  regulation of cell-substrate adhesion  integral component of membrane  positive regulation of cell migration  negative regulation of actin filament polymerization  cortical actin cytoskeleton  membrane raft organization  negative regulation of heterotypic cell-cell adhesion  membrane raft  cell-cell junction maintenance  establishment of endothelial barrier  extracellular exosome  protein targeting to plasma membrane  negative regulation of protein kinase C signaling  positive regulation of substrate adhesion-dependent cell spreading  
NDEx NetworkMYADM
Atlas of Cancer Signalling NetworkMYADM
Wikipedia pathwaysMYADM
Orthology - Evolution
OrthoDB91663
GeneTree (enSembl)ENSG00000179820
Phylogenetic Trees/Animal Genes : TreeFamMYADM
HOVERGENQ96S97
HOGENOMQ96S97
Homologs : HomoloGeneMYADM
Homology/Alignments : Family Browser (UCSC)MYADM
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMYADM [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MYADM
dbVarMYADM
ClinVarMYADM
1000_GenomesMYADM 
Exome Variant ServerMYADM
ExAC (Exome Aggregation Consortium)MYADM (select the gene name)
Genetic variants : HAPMAP91663
Genomic Variants (DGV)MYADM [DGVbeta]
DECIPHERMYADM [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMYADM 
Mutations
ICGC Data PortalMYADM 
TCGA Data PortalMYADM 
Broad Tumor PortalMYADM
OASIS PortalMYADM [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMYADM  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMYADM
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MYADM
DgiDB (Drug Gene Interaction Database)MYADM
DoCM (Curated mutations)MYADM (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MYADM (select a term)
intoGenMYADM
Cancer3DMYADM(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609959   
Orphanet
MedgenMYADM
Genetic Testing Registry MYADM
NextProtQ96S97 [Medical]
TSGene91663
GENETestsMYADM
Target ValidationMYADM
Huge Navigator MYADM [HugePedia]
snp3D : Map Gene to Disease91663
BioCentury BCIQMYADM
ClinGenMYADM
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD91663
Chemical/Pharm GKB GenePA31344
Clinical trialMYADM
Miscellaneous
canSAR (ICR)MYADM (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMYADM
EVEXMYADM
GoPubMedMYADM
iHOPMYADM
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 16:33:13 CEST 2017

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