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MYCBPAP (MYCBP associated protein)

Identity

Alias_symbol (synonym)AMAP-1
DKFZp434N1415
Other aliasAMAP1
HGNC (Hugo) MYCBPAP
LocusID (NCBI) 84073
Atlas_Id 70603
Location 17q21.33  [Link to chromosome band 17q21]
Location_base_pair Starts at 48585745 and ends at 48608862 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MYCBPAP   19677
Cards
Entrez_Gene (NCBI)MYCBPAP  84073  MYCBP associated protein
AliasesAMAP-1; AMAP1
GeneCards (Weizmann)MYCBPAP
Ensembl hg19 (Hinxton)ENSG00000136449 [Gene_View]  chr17:48585745-48608862 [Contig_View]  MYCBPAP [Vega]
Ensembl hg38 (Hinxton)ENSG00000136449 [Gene_View]  chr17:48585745-48608862 [Contig_View]  MYCBPAP [Vega]
ICGC DataPortalENSG00000136449
TCGA cBioPortalMYCBPAP
AceView (NCBI)MYCBPAP
Genatlas (Paris)MYCBPAP
WikiGenes84073
SOURCE (Princeton)MYCBPAP
Genetics Home Reference (NIH)MYCBPAP
Genomic and cartography
GoldenPath hg19 (UCSC)MYCBPAP  -     chr17:48585745-48608862 +  17q21.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MYCBPAP  -     17q21.33   [Description]    (hg38-Dec_2013)
EnsemblMYCBPAP - 17q21.33 [CytoView hg19]  MYCBPAP - 17q21.33 [CytoView hg38]
Mapping of homologs : NCBIMYCBPAP [Mapview hg19]  MYCBPAP [Mapview hg38]
OMIM609835   
Gene and transcription
Genbank (Entrez)AB083068 AK127992 AK303041 AK314052 AL136765
RefSeq transcript (Entrez)NM_032133
RefSeq genomic (Entrez)NC_000017 NC_018928 NT_010783 NW_004929407
Consensus coding sequences : CCDS (NCBI)MYCBPAP
Cluster EST : UnigeneHs.398196 [ NCBI ]
CGAP (NCI)Hs.398196
Alternative Splicing GalleryENSG00000136449
Gene ExpressionMYCBPAP [ NCBI-GEO ]   MYCBPAP [ EBI - ARRAY_EXPRESS ]   MYCBPAP [ SEEK ]   MYCBPAP [ MEM ]
Gene Expression Viewer (FireBrowse)MYCBPAP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84073
GTEX Portal (Tissue expression)MYCBPAP
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TBZ2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TBZ2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TBZ2
Splice isoforms : SwissVarQ8TBZ2
PhosPhoSitePlusQ8TBZ2
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MYCBPAP
DMDM Disease mutations84073
Blocks (Seattle)MYCBPAP
SuperfamilyQ8TBZ2
Human Protein AtlasENSG00000136449
Peptide AtlasQ8TBZ2
HPRD11378
IPIIPI00925845   IPI00784115   IPI00926041   IPI00925797   IPI00926000   
Protein Interaction databases
DIP (DOE-UCLA)Q8TBZ2
IntAct (EBI)Q8TBZ2
FunCoupENSG00000136449
BioGRIDMYCBPAP
STRING (EMBL)MYCBPAP
ZODIACMYCBPAP
Ontologies - Pathways
QuickGOQ8TBZ2
Ontology : AmiGOprotein binding  cytoplasm  synaptic transmission  multicellular organismal development  spermatogenesis  membrane  cell differentiation  
Ontology : EGO-EBIprotein binding  cytoplasm  synaptic transmission  multicellular organismal development  spermatogenesis  membrane  cell differentiation  
NDEx NetworkMYCBPAP
Atlas of Cancer Signalling NetworkMYCBPAP
Wikipedia pathwaysMYCBPAP
Orthology - Evolution
OrthoDB84073
GeneTree (enSembl)ENSG00000136449
Phylogenetic Trees/Animal Genes : TreeFamMYCBPAP
HOVERGENQ8TBZ2
HOGENOMQ8TBZ2
Homologs : HomoloGeneMYCBPAP
Homology/Alignments : Family Browser (UCSC)MYCBPAP
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMYCBPAP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MYCBPAP
dbVarMYCBPAP
ClinVarMYCBPAP
1000_GenomesMYCBPAP 
Exome Variant ServerMYCBPAP
ExAC (Exome Aggregation Consortium)MYCBPAP (select the gene name)
Genetic variants : HAPMAP84073
Genomic Variants (DGV)MYCBPAP [DGVbeta]
DECIPHER (Syndromes)17:48585745-48608862  ENSG00000136449
CONAN: Copy Number AnalysisMYCBPAP 
Mutations
ICGC Data PortalMYCBPAP 
TCGA Data PortalMYCBPAP 
Broad Tumor PortalMYCBPAP
OASIS PortalMYCBPAP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMYCBPAP  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMYCBPAP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MYCBPAP
DgiDB (Drug Gene Interaction Database)MYCBPAP
DoCM (Curated mutations)MYCBPAP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MYCBPAP (select a term)
intoGenMYCBPAP
Cancer3DMYCBPAP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609835   
Orphanet
MedgenMYCBPAP
Genetic Testing Registry MYCBPAP
NextProtQ8TBZ2 [Medical]
TSGene84073
GENETestsMYCBPAP
Huge Navigator MYCBPAP [HugePedia]
snp3D : Map Gene to Disease84073
BioCentury BCIQMYCBPAP
ClinGenMYCBPAP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84073
Chemical/Pharm GKB GenePA134886355
Clinical trialMYCBPAP
Miscellaneous
canSAR (ICR)MYCBPAP (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMYCBPAP
EVEXMYCBPAP
GoPubMedMYCBPAP
iHOPMYCBPAP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:34:14 CET 2017

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