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MYD88 (MYD88 innate immune signal transduction adaptor)

Identity

Alias (NCBI)IMD68
MYD88D
HGNC (Hugo) MYD88
HGNC Previous namemyeloid differentiation primary response gene (88)
 myeloid differentiation primary response 88
LocusID (NCBI) 4615
Atlas_Id 41476
Location 3p22.2  [Link to chromosome band 3p22]
Location_base_pair Starts at 38138661 and ends at 38143021 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
MYD88 (3p22.2) / ARHGEF10L (1p36.13)MYD88 (3p22.2) / INO80B (2p13.1)MYD88 (3p22.2) / MYLK (3q21.1)
NEURL1B (5q35.1) / MYD88 (3p22.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



Other Leukemias implicated (Data extracted from papers in the Atlas) [ 6 ]
  B-cell Prolymphocytic Leukemia
Primary DLBCL of the central nervous system (CNS)
Gamma heavy chain disease
Ocular adnexal marginal zone lymphoma (OAMZL)
Primary Cutaneous B-Cell Lymphomas
Waldenstrom macroglobulinemia


External links

Nomenclature
HGNC (Hugo)MYD88   7562
LRG (Locus Reference Genomic)LRG_157
Cards
Entrez_Gene (NCBI)MYD88    MYD88 innate immune signal transduction adaptor
AliasesIMD68; MYD88D
GeneCards (Weizmann)MYD88
Ensembl hg19 (Hinxton)ENSG00000172936 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000172936 [Gene_View]  ENSG00000172936 [Sequence]  chr3:38138661-38143021 [Contig_View]  MYD88 [Vega]
ICGC DataPortalENSG00000172936
TCGA cBioPortalMYD88
AceView (NCBI)MYD88
Genatlas (Paris)MYD88
SOURCE (Princeton)MYD88
Genetics Home Reference (NIH)MYD88
Genomic and cartography
GoldenPath hg38 (UCSC)MYD88  -     chr3:38138661-38143021 +  3p22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MYD88  -     3p22.2   [Description]    (hg19-Feb_2009)
GoldenPathMYD88 - 3p22.2 [CytoView hg19]  MYD88 - 3p22.2 [CytoView hg38]
ImmunoBaseENSG00000172936
genome Data Viewer NCBIMYD88 [Mapview hg19]  
OMIM153600   602170   612260   
Gene and transcription
Genbank (Entrez)AB446470 AK097983 AK124685 AK296570 AK296716
RefSeq transcript (Entrez)NM_001172566 NM_001172567 NM_001172568 NM_001172569 NM_001365876 NM_001365877 NM_001374787 NM_001374788 NM_002468
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MYD88
Alternative Splicing GalleryENSG00000172936
Gene ExpressionMYD88 [ NCBI-GEO ]   MYD88 [ EBI - ARRAY_EXPRESS ]   MYD88 [ SEEK ]   MYD88 [ MEM ]
Gene Expression Viewer (FireBrowse)MYD88 [ Firebrowse - Broad ]
GenevisibleExpression of MYD88 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4615
GTEX Portal (Tissue expression)MYD88
Human Protein AtlasENSG00000172936-MYD88 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MYD88
Blocks (Seattle)MYD88
Human Protein Atlas [tissue]ENSG00000172936-MYD88 [tissue]
HPRD03703
IPIIPI00798074   IPI01013725   IPI00908714   IPI00924787   IPI00878858   IPI00910972   IPI00909842   IPI00925056   
Protein Interaction databases
BioGRIDMYD88
STRING (EMBL)MYD88
ZODIACMYD88
Ontologies - Pathways
Litterature
PubMed499 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXMYD88
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 25 19:35:20 CET 2021

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