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MYEF2 (myelin expression factor 2)

Identity

Alias_symbol (synonym)MEF-2
FLJ11213
KIAA1341
HsT18564
Other aliasMST156
MSTP156
myEF-2
HGNC (Hugo) MYEF2
LocusID (NCBI) 50804
Atlas_Id 70604
Location 15q21.1  [Link to chromosome band 15q21]
Location_base_pair Starts at 48139428 and ends at 48178361 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MYEF2   17940
Cards
Entrez_Gene (NCBI)MYEF2  50804  myelin expression factor 2
AliasesHsT18564; MEF-2; MST156; MSTP156; 
myEF-2
GeneCards (Weizmann)MYEF2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr15:48139428-48178361 [Contig_View]  MYEF2 [Vega]
TCGA cBioPortalMYEF2
AceView (NCBI)MYEF2
Genatlas (Paris)MYEF2
WikiGenes50804
SOURCE (Princeton)MYEF2
Genetics Home Reference (NIH)MYEF2
Genomic and cartography
GoldenPath hg38 (UCSC)MYEF2  -     chr15:48139428-48178361 -  15q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MYEF2  -     15q21.1   [Description]    (hg19-Feb_2009)
EnsemblMYEF2 - 15q21.1 [CytoView hg19]  MYEF2 - 15q21.1 [CytoView hg38]
Mapping of homologs : NCBIMYEF2 [Mapview hg19]  MYEF2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB037762 AF106685 AF190159 AK002075 AK023133
RefSeq transcript (Entrez)NM_001301210 NM_016132
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MYEF2
Cluster EST : UnigeneHs.653123 [ NCBI ]
CGAP (NCI)Hs.653123
Gene ExpressionMYEF2 [ NCBI-GEO ]   MYEF2 [ EBI - ARRAY_EXPRESS ]   MYEF2 [ SEEK ]   MYEF2 [ MEM ]
Gene Expression Viewer (FireBrowse)MYEF2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)50804
GTEX Portal (Tissue expression)MYEF2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9P2K5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9P2K5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9P2K5
Splice isoforms : SwissVarQ9P2K5
PhosPhoSitePlusQ9P2K5
Domaine pattern : Prosite (Expaxy)RRM (PS50102)   
Domains : Interpro (EBI)Nucleotide-bd_a/b_plait    RRM_dom   
Domain families : Pfam (Sanger)RRM_1 (PF00076)   
Domain families : Pfam (NCBI)pfam00076   
Domain families : Smart (EMBL)RRM (SM00360)  
Conserved Domain (NCBI)MYEF2
DMDM Disease mutations50804
Blocks (Seattle)MYEF2
SuperfamilyQ9P2K5
Peptide AtlasQ9P2K5
HPRD14794
IPIIPI00555833   IPI00386418   IPI00555987   IPI00292940   
Protein Interaction databases
DIP (DOE-UCLA)Q9P2K5
IntAct (EBI)Q9P2K5
BioGRIDMYEF2
STRING (EMBL)MYEF2
ZODIACMYEF2
Ontologies - Pathways
QuickGOQ9P2K5
Ontology : AmiGORNA polymerase II transcription factor activity, sequence-specific DNA binding  single-stranded DNA binding  RNA binding  nucleus  transcription, DNA-templated  regulation of transcription from RNA polymerase II promoter  myotube differentiation  neuron differentiation  
Ontology : EGO-EBIRNA polymerase II transcription factor activity, sequence-specific DNA binding  single-stranded DNA binding  RNA binding  nucleus  transcription, DNA-templated  regulation of transcription from RNA polymerase II promoter  myotube differentiation  neuron differentiation  
NDEx NetworkMYEF2
Atlas of Cancer Signalling NetworkMYEF2
Wikipedia pathwaysMYEF2
Orthology - Evolution
OrthoDB50804
Phylogenetic Trees/Animal Genes : TreeFamMYEF2
HOVERGENQ9P2K5
HOGENOMQ9P2K5
Homologs : HomoloGeneMYEF2
Homology/Alignments : Family Browser (UCSC)MYEF2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMYEF2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MYEF2
dbVarMYEF2
ClinVarMYEF2
1000_GenomesMYEF2 
Exome Variant ServerMYEF2
ExAC (Exome Aggregation Consortium)MYEF2 (select the gene name)
Genetic variants : HAPMAP50804
Genomic Variants (DGV)MYEF2 [DGVbeta]
DECIPHERMYEF2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMYEF2 
Mutations
ICGC Data PortalMYEF2 
TCGA Data PortalMYEF2 
Broad Tumor PortalMYEF2
OASIS PortalMYEF2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMYEF2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMYEF2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MYEF2
DgiDB (Drug Gene Interaction Database)MYEF2
DoCM (Curated mutations)MYEF2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MYEF2 (select a term)
intoGenMYEF2
Cancer3DMYEF2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenMYEF2
Genetic Testing Registry MYEF2
NextProtQ9P2K5 [Medical]
TSGene50804
GENETestsMYEF2
Huge Navigator MYEF2 [HugePedia]
snp3D : Map Gene to Disease50804
BioCentury BCIQMYEF2
ClinGenMYEF2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD50804
Chemical/Pharm GKB GenePA134877084
Clinical trialMYEF2
Miscellaneous
canSAR (ICR)MYEF2 (select the gene name)
Probes
Litterature
PubMed28 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMYEF2
EVEXMYEF2
GoPubMedMYEF2
iHOPMYEF2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:44:18 CEST 2017

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