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MYH15 (myosin heavy chain 15)

Identity

Alias_namesmyosin, heavy polypeptide 15
Alias_symbol (synonym)KIAA1000
Other alias-
HGNC (Hugo) MYH15
LocusID (NCBI) 22989
Atlas_Id 70609
Location 3q13.13  [Link to chromosome band 3q13]
Location_base_pair Starts at 108380369 and ends at 108529322 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MYH15   31073
Cards
Entrez_Gene (NCBI)MYH15  22989  myosin heavy chain 15
Aliases
GeneCards (Weizmann)MYH15
Ensembl hg19 (Hinxton)ENSG00000144821 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000144821 [Gene_View]  chr3:108380369-108529322 [Contig_View]  MYH15 [Vega]
ICGC DataPortalENSG00000144821
TCGA cBioPortalMYH15
AceView (NCBI)MYH15
Genatlas (Paris)MYH15
WikiGenes22989
SOURCE (Princeton)MYH15
Genetics Home Reference (NIH)MYH15
Genomic and cartography
GoldenPath hg38 (UCSC)MYH15  -     chr3:108380369-108529322 -  3q13.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MYH15  -     3q13.13   [Description]    (hg19-Feb_2009)
EnsemblMYH15 - 3q13.13 [CytoView hg19]  MYH15 - 3q13.13 [CytoView hg38]
Mapping of homologs : NCBIMYH15 [Mapview hg19]  MYH15 [Mapview hg38]
OMIM609929   
Gene and transcription
Genbank (Entrez)AB023217 AK055436 AK126801 BC172390
RefSeq transcript (Entrez)NM_014981
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MYH15
Cluster EST : UnigeneHs.731060 [ NCBI ]
CGAP (NCI)Hs.731060
Alternative Splicing GalleryENSG00000144821
Gene ExpressionMYH15 [ NCBI-GEO ]   MYH15 [ EBI - ARRAY_EXPRESS ]   MYH15 [ SEEK ]   MYH15 [ MEM ]
Gene Expression Viewer (FireBrowse)MYH15 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)22989
GTEX Portal (Tissue expression)MYH15
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y2K3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y2K3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y2K3
Splice isoforms : SwissVarQ9Y2K3
PhosPhoSitePlusQ9Y2K3
Domaine pattern : Prosite (Expaxy)MYOSIN_MOTOR (PS51456)   
Domains : Interpro (EBI)Myosin-like_IQ_dom    Myosin_head_motor_dom    Myosin_N    Myosin_tail    P-loop_NTPase   
Domain families : Pfam (Sanger)Myosin_head (PF00063)    Myosin_N (PF02736)    Myosin_tail_1 (PF01576)   
Domain families : Pfam (NCBI)pfam00063    pfam02736    pfam01576   
Domain families : Smart (EMBL)MYSc (SM00242)  
Conserved Domain (NCBI)MYH15
DMDM Disease mutations22989
Blocks (Seattle)MYH15
SuperfamilyQ9Y2K3
Human Protein AtlasENSG00000144821
Peptide AtlasQ9Y2K3
IPIIPI00180408   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y2K3
IntAct (EBI)Q9Y2K3
FunCoupENSG00000144821
BioGRIDMYH15
STRING (EMBL)MYH15
ZODIACMYH15
Ontologies - Pathways
QuickGOQ9Y2K3
Ontology : AmiGOextraocular skeletal muscle development  motor activity  actin binding  calmodulin binding  ATP binding  myofibril  myosin filament  
Ontology : EGO-EBIextraocular skeletal muscle development  motor activity  actin binding  calmodulin binding  ATP binding  myofibril  myosin filament  
Pathways : KEGGTight junction   
NDEx NetworkMYH15
Atlas of Cancer Signalling NetworkMYH15
Wikipedia pathwaysMYH15
Orthology - Evolution
OrthoDB22989
GeneTree (enSembl)ENSG00000144821
Phylogenetic Trees/Animal Genes : TreeFamMYH15
HOVERGENQ9Y2K3
HOGENOMQ9Y2K3
Homologs : HomoloGeneMYH15
Homology/Alignments : Family Browser (UCSC)MYH15
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMYH15 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MYH15
dbVarMYH15
ClinVarMYH15
1000_GenomesMYH15 
Exome Variant ServerMYH15
ExAC (Exome Aggregation Consortium)MYH15 (select the gene name)
Genetic variants : HAPMAP22989
Genomic Variants (DGV)MYH15 [DGVbeta]
DECIPHERMYH15 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMYH15 
Mutations
ICGC Data PortalMYH15 
TCGA Data PortalMYH15 
Broad Tumor PortalMYH15
OASIS PortalMYH15 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMYH15  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMYH15
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MYH15
DgiDB (Drug Gene Interaction Database)MYH15
DoCM (Curated mutations)MYH15 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MYH15 (select a term)
intoGenMYH15
Cancer3DMYH15(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609929   
Orphanet
MedgenMYH15
Genetic Testing Registry MYH15
NextProtQ9Y2K3 [Medical]
TSGene22989
GENETestsMYH15
Target ValidationMYH15
Huge Navigator MYH15 [HugePedia]
snp3D : Map Gene to Disease22989
BioCentury BCIQMYH15
ClinGenMYH15
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD22989
Chemical/Pharm GKB GenePA134958635
Clinical trialMYH15
Miscellaneous
canSAR (ICR)MYH15 (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMYH15
EVEXMYH15
GoPubMedMYH15
iHOPMYH15
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:32:01 CEST 2017

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