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MYL7 (myosin light chain 7)

Identity

Alias_namesmyosin, light polypeptide 7, regulatory
myosin, light chain 7, regulatory
Alias_symbol (synonym)MYLC2A
MYL2A
Other alias
HGNC (Hugo) MYL7
LocusID (NCBI) 58498
Atlas_Id 70618
Location 7p13  [Link to chromosome band 7p13]
Location_base_pair Starts at 44138864 and ends at 44141317 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
PTGDS (9q34.3) / MYL7 (7p13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MYL7   21719
Cards
Entrez_Gene (NCBI)MYL7  58498  myosin light chain 7
AliasesMYL2A; MYLC2A
GeneCards (Weizmann)MYL7
Ensembl hg19 (Hinxton)ENSG00000106631 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000106631 [Gene_View]  chr7:44138864-44141317 [Contig_View]  MYL7 [Vega]
ICGC DataPortalENSG00000106631
TCGA cBioPortalMYL7
AceView (NCBI)MYL7
Genatlas (Paris)MYL7
WikiGenes58498
SOURCE (Princeton)MYL7
Genetics Home Reference (NIH)MYL7
Genomic and cartography
GoldenPath hg38 (UCSC)MYL7  -     chr7:44138864-44141317 -  7p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MYL7  -     7p13   [Description]    (hg19-Feb_2009)
EnsemblMYL7 - 7p13 [CytoView hg19]  MYL7 - 7p13 [CytoView hg38]
Mapping of homologs : NCBIMYL7 [Mapview hg19]  MYL7 [Mapview hg38]
OMIM613993   
Gene and transcription
Genbank (Entrez)AK311869 BC027915 JF432610 M94547 W17098
RefSeq transcript (Entrez)NM_021223
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MYL7
Cluster EST : UnigeneHs.75636 [ NCBI ]
CGAP (NCI)Hs.75636
Alternative Splicing GalleryENSG00000106631
Gene ExpressionMYL7 [ NCBI-GEO ]   MYL7 [ EBI - ARRAY_EXPRESS ]   MYL7 [ SEEK ]   MYL7 [ MEM ]
Gene Expression Viewer (FireBrowse)MYL7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)58498
GTEX Portal (Tissue expression)MYL7
Human Protein AtlasENSG00000106631-MYL7 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ01449   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ01449  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ01449
Splice isoforms : SwissVarQ01449
PhosPhoSitePlusQ01449
Domaine pattern : Prosite (Expaxy)EF_HAND_1 (PS00018)    EF_HAND_2 (PS50222)   
Domains : Interpro (EBI)EF-hand-dom_pair    EF_Hand_1_Ca_BS    EF_hand_dom   
Domain families : Pfam (Sanger)EF-hand_7 (PF13499)   
Domain families : Pfam (NCBI)pfam13499   
Domain families : Smart (EMBL)EFh (SM00054)  
Conserved Domain (NCBI)MYL7
DMDM Disease mutations58498
Blocks (Seattle)MYL7
SuperfamilyQ01449
Human Protein Atlas [tissue]ENSG00000106631-MYL7 [tissue]
Peptide AtlasQ01449
HPRD10105
IPIIPI00009677   IPI00924862   IPI00927692   IPI00927911   IPI00927224   IPI00924897   IPI00925133   IPI00924663   
Protein Interaction databases
DIP (DOE-UCLA)Q01449
IntAct (EBI)Q01449
FunCoupENSG00000106631
BioGRIDMYL7
STRING (EMBL)MYL7
ZODIACMYL7
Ontologies - Pathways
QuickGOQ01449
Ontology : AmiGOcalcium ion binding  protein binding  cytosol  muscle contraction  myosin complex  A band  dendritic spine  
Ontology : EGO-EBIcalcium ion binding  protein binding  cytosol  muscle contraction  myosin complex  A band  dendritic spine  
Pathways : KEGGFocal adhesion    Tight junction    Leukocyte transendothelial migration    Regulation of actin cytoskeleton   
NDEx NetworkMYL7
Atlas of Cancer Signalling NetworkMYL7
Wikipedia pathwaysMYL7
Orthology - Evolution
OrthoDB58498
GeneTree (enSembl)ENSG00000106631
Phylogenetic Trees/Animal Genes : TreeFamMYL7
HOVERGENQ01449
HOGENOMQ01449
Homologs : HomoloGeneMYL7
Homology/Alignments : Family Browser (UCSC)MYL7
Gene fusions - Rearrangements
Tumor Fusion PortalMYL7
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMYL7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MYL7
dbVarMYL7
ClinVarMYL7
1000_GenomesMYL7 
Exome Variant ServerMYL7
ExAC (Exome Aggregation Consortium)ENSG00000106631
GNOMAD BrowserENSG00000106631
Genetic variants : HAPMAP58498
Genomic Variants (DGV)MYL7 [DGVbeta]
DECIPHERMYL7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMYL7 
Mutations
ICGC Data PortalMYL7 
TCGA Data PortalMYL7 
Broad Tumor PortalMYL7
OASIS PortalMYL7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMYL7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMYL7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MYL7
DgiDB (Drug Gene Interaction Database)MYL7
DoCM (Curated mutations)MYL7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MYL7 (select a term)
intoGenMYL7
Cancer3DMYL7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613993   
Orphanet
DisGeNETMYL7
MedgenMYL7
Genetic Testing Registry MYL7
NextProtQ01449 [Medical]
TSGene58498
GENETestsMYL7
Target ValidationMYL7
Huge Navigator MYL7 [HugePedia]
snp3D : Map Gene to Disease58498
BioCentury BCIQMYL7
ClinGenMYL7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD58498
Chemical/Pharm GKB GenePA134939476
Clinical trialMYL7
Miscellaneous
canSAR (ICR)MYL7 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMYL7
EVEXMYL7
GoPubMedMYL7
iHOPMYL7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Nov 20 20:02:37 CET 2017

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