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MYNN (myoneurin)

Identity

Alias_symbol (synonym)SBBIZ1
ZBTB31
ZNF902
Other aliasOSZF
HGNC (Hugo) MYNN
LocusID (NCBI) 55892
Atlas_Id 70624
Location 3q26.2  [Link to chromosome band 3q26]
Location_base_pair Starts at 169490853 and ends at 169507504 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
MYNN (3q26.2) / SMAP1 (6q13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MYNN   14955
Cards
Entrez_Gene (NCBI)MYNN  55892  myoneurin
AliasesOSZF; SBBIZ1; ZBTB31; ZNF902
GeneCards (Weizmann)MYNN
Ensembl hg19 (Hinxton)ENSG00000085274 [Gene_View]  chr3:169490853-169507504 [Contig_View]  MYNN [Vega]
Ensembl hg38 (Hinxton)ENSG00000085274 [Gene_View]  chr3:169490853-169507504 [Contig_View]  MYNN [Vega]
ICGC DataPortalENSG00000085274
TCGA cBioPortalMYNN
AceView (NCBI)MYNN
Genatlas (Paris)MYNN
WikiGenes55892
SOURCE (Princeton)MYNN
Genetics Home Reference (NIH)MYNN
Genomic and cartography
GoldenPath hg19 (UCSC)MYNN  -     chr3:169490853-169507504 +  3q26.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MYNN  -     3q26.2   [Description]    (hg38-Dec_2013)
EnsemblMYNN - 3q26.2 [CytoView hg19]  MYNN - 3q26.2 [CytoView hg38]
Mapping of homologs : NCBIMYNN [Mapview hg19]  MYNN [Mapview hg38]
OMIM606042   
Gene and transcription
Genbank (Entrez)AB079777 AB079778 AB528460 AF076249 AF148848
RefSeq transcript (Entrez)NM_001185118 NM_001185119 NM_018657
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_005612 NW_004929311
Consensus coding sequences : CCDS (NCBI)MYNN
Cluster EST : UnigeneHs.630744 [ NCBI ]
CGAP (NCI)Hs.630744
Alternative Splicing GalleryENSG00000085274
Gene ExpressionMYNN [ NCBI-GEO ]   MYNN [ EBI - ARRAY_EXPRESS ]   MYNN [ SEEK ]   MYNN [ MEM ]
Gene Expression Viewer (FireBrowse)MYNN [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55892
GTEX Portal (Tissue expression)MYNN
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NPC7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NPC7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NPC7
Splice isoforms : SwissVarQ9NPC7
PhosPhoSitePlusQ9NPC7
Domaine pattern : Prosite (Expaxy)BTB (PS50097)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)BTB/POZ-like    BTB/POZ_fold    BTB_POZ    Znf_C2H2    Znf_C2H2-like    Znf_C2H2/integrase_DNA-bd   
Domain families : Pfam (Sanger)BTB (PF00651)   
Domain families : Pfam (NCBI)pfam00651   
Domain families : Smart (EMBL)BTB (SM00225)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)MYNN
DMDM Disease mutations55892
Blocks (Seattle)MYNN
PDB (SRS)2VPK   
PDB (PDBSum)2VPK   
PDB (IMB)2VPK   
PDB (RSDB)2VPK   
Structural Biology KnowledgeBase2VPK   
SCOP (Structural Classification of Proteins)2VPK   
CATH (Classification of proteins structures)2VPK   
SuperfamilyQ9NPC7
Human Protein AtlasENSG00000085274
Peptide AtlasQ9NPC7
HPRD06920
IPIIPI00410331   IPI00384748   IPI00784972   IPI00784923   
Protein Interaction databases
DIP (DOE-UCLA)Q9NPC7
IntAct (EBI)Q9NPC7
FunCoupENSG00000085274
BioGRIDMYNN
STRING (EMBL)MYNN
ZODIACMYNN
Ontologies - Pathways
QuickGOQ9NPC7
Ontology : AmiGODNA binding  sequence-specific DNA binding transcription factor activity  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  zinc ion binding  
Ontology : EGO-EBIDNA binding  sequence-specific DNA binding transcription factor activity  nucleus  transcription, DNA-templated  regulation of transcription, DNA-templated  zinc ion binding  
NDEx NetworkMYNN
Atlas of Cancer Signalling NetworkMYNN
Wikipedia pathwaysMYNN
Orthology - Evolution
OrthoDB55892
GeneTree (enSembl)ENSG00000085274
Phylogenetic Trees/Animal Genes : TreeFamMYNN
HOVERGENQ9NPC7
HOGENOMQ9NPC7
Homologs : HomoloGeneMYNN
Homology/Alignments : Family Browser (UCSC)MYNN
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMYNN [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MYNN
dbVarMYNN
ClinVarMYNN
1000_GenomesMYNN 
Exome Variant ServerMYNN
ExAC (Exome Aggregation Consortium)MYNN (select the gene name)
Genetic variants : HAPMAP55892
Genomic Variants (DGV)MYNN [DGVbeta]
DECIPHER (Syndromes)3:169490853-169507504  ENSG00000085274
CONAN: Copy Number AnalysisMYNN 
Mutations
ICGC Data PortalMYNN 
TCGA Data PortalMYNN 
Broad Tumor PortalMYNN
OASIS PortalMYNN [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMYNN  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMYNN
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MYNN
DgiDB (Drug Gene Interaction Database)MYNN
DoCM (Curated mutations)MYNN (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MYNN (select a term)
intoGenMYNN
Cancer3DMYNN(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606042   
Orphanet
MedgenMYNN
Genetic Testing Registry MYNN
NextProtQ9NPC7 [Medical]
TSGene55892
GENETestsMYNN
Huge Navigator MYNN [HugePedia]
snp3D : Map Gene to Disease55892
BioCentury BCIQMYNN
ClinGenMYNN
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55892
Chemical/Pharm GKB GenePA31393
Clinical trialMYNN
Miscellaneous
canSAR (ICR)MYNN (select the gene name)
Probes
Litterature
PubMed27 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMYNN
EVEXMYNN
GoPubMedMYNN
iHOPMYNN
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:34:19 CET 2017

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