Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MYO16-AS1 (MYO16 antisense RNA 1)

Identity

Alias_namesMYO16 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) MYO16-AS1
LocusID (NCBI) 100885782
Atlas_Id 70627
Location 13q33.3  [Link to chromosome band 13q33]
Location_base_pair Starts at 109163905 and ends at 109167303 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MYO16-AS1   39913
Cards
Entrez_Gene (NCBI)MYO16-AS1  100885782  MYO16 antisense RNA 1
Aliases
GeneCards (Weizmann)MYO16-AS1
Ensembl hg19 (Hinxton)ENSG00000236242 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236242 [Gene_View]  chr13:109163905-109167303 [Contig_View]  MYO16-AS1 [Vega]
ICGC DataPortalENSG00000236242
TCGA cBioPortalMYO16-AS1
AceView (NCBI)MYO16-AS1
Genatlas (Paris)MYO16-AS1
WikiGenes100885782
SOURCE (Princeton)MYO16-AS1
Genetics Home Reference (NIH)MYO16-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)MYO16-AS1  -     chr13:109163905-109167303 -  13q33.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MYO16-AS1  -     13q33.3   [Description]    (hg19-Feb_2009)
EnsemblMYO16-AS1 - 13q33.3 [CytoView hg19]  MYO16-AS1 - 13q33.3 [CytoView hg38]
Mapping of homologs : NCBIMYO16-AS1 [Mapview hg19]  MYO16-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BG181984
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MYO16-AS1
Cluster EST : UnigeneHs.655942 [ NCBI ]
CGAP (NCI)Hs.655942
Alternative Splicing GalleryENSG00000236242
Gene ExpressionMYO16-AS1 [ NCBI-GEO ]   MYO16-AS1 [ EBI - ARRAY_EXPRESS ]   MYO16-AS1 [ SEEK ]   MYO16-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)MYO16-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100885782
GTEX Portal (Tissue expression)MYO16-AS1
Human Protein AtlasENSG00000236242-MYO16-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MYO16-AS1
DMDM Disease mutations100885782
Blocks (Seattle)MYO16-AS1
Human Protein Atlas [tissue]ENSG00000236242-MYO16-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000236242
BioGRIDMYO16-AS1
STRING (EMBL)MYO16-AS1
ZODIACMYO16-AS1
Ontologies - Pathways
Huge Navigator MYO16-AS1 [HugePedia]
snp3D : Map Gene to Disease100885782
BioCentury BCIQMYO16-AS1
ClinGenMYO16-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100885782
Clinical trialMYO16-AS1
Miscellaneous
canSAR (ICR)MYO16-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMYO16-AS1
EVEXMYO16-AS1
GoPubMedMYO16-AS1
iHOPMYO16-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:28:43 CET 2017

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