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MYO19 (myosin XIX)

Identity

Alias_namesMYOHD1
myosin head domain containing 1
Alias_symbol (synonym)FLJ22865
Other alias
HGNC (Hugo) MYO19
LocusID (NCBI) 80179
Atlas_Id 54483
Location 17q12  [Link to chromosome band 17q12]
Location_base_pair Starts at 34868917 and ends at 34891305 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
MYO19 (17q12) / MYO19 (17q12)MYO19 (17q12) / STK32C (10q26.3)MYO19 (17q12) / UTP4 (16q22.1)
SKA2 (17q22) / MYO19 (17q12)TRIM37 (17q22) / MYO19 (17q12)USP22 (17p11.2) / MYO19 (17q12)
MYO19 17q12 / STK32C 10q26.3USP22 17p11.2 / MYO19 17q12

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MYO19   26234
Cards
Entrez_Gene (NCBI)MYO19  80179  myosin XIX
AliasesMYOHD1
GeneCards (Weizmann)MYO19
Ensembl hg19 (Hinxton)ENSG00000278259 [Gene_View]  chr17:34868917-34891305 [Contig_View]  MYO19 [Vega]
Ensembl hg38 (Hinxton)ENSG00000278259 [Gene_View]  chr17:34868917-34891305 [Contig_View]  MYO19 [Vega]
ICGC DataPortalENSG00000278259
TCGA cBioPortalMYO19
AceView (NCBI)MYO19
Genatlas (Paris)MYO19
WikiGenes80179
SOURCE (Princeton)MYO19
Genetics Home Reference (NIH)MYO19
Genomic and cartography
GoldenPath hg19 (UCSC)MYO19  -     chr17:34868917-34891305 -  17q12   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MYO19  -     17q12   [Description]    (hg38-Dec_2013)
EnsemblMYO19 - 17q12 [CytoView hg19]  MYO19 - 17q12 [CytoView hg38]
Mapping of homologs : NCBIMYO19 [Mapview hg19]  MYO19 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA631248 AB209035 AK026518 AK293903 AK299802
RefSeq transcript (Entrez)NM_001033579 NM_001033580 NM_001163735 NM_025109
RefSeq genomic (Entrez)NC_000017 NC_018928 NT_010783 NT_187614 NW_004929407
Consensus coding sequences : CCDS (NCBI)MYO19
Cluster EST : UnigeneHs.302051 [ NCBI ]
CGAP (NCI)Hs.302051
Alternative Splicing GalleryENSG00000278259
Gene ExpressionMYO19 [ NCBI-GEO ]   MYO19 [ EBI - ARRAY_EXPRESS ]   MYO19 [ SEEK ]   MYO19 [ MEM ]
Gene Expression Viewer (FireBrowse)MYO19 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80179
GTEX Portal (Tissue expression)MYO19
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96H55   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96H55  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96H55
Splice isoforms : SwissVarQ96H55
PhosPhoSitePlusQ96H55
Domaine pattern : Prosite (Expaxy)IQ (PS50096)    MYOSIN_MOTOR (PS51456)   
Domains : Interpro (EBI)IQ_motif_EF-hand-BS    Myosin_head_motor_dom    P-loop_NTPase   
Domain families : Pfam (Sanger)Myosin_head (PF00063)   
Domain families : Pfam (NCBI)pfam00063   
Domain families : Smart (EMBL)IQ (SM00015)  MYSc (SM00242)  
Conserved Domain (NCBI)MYO19
DMDM Disease mutations80179
Blocks (Seattle)MYO19
SuperfamilyQ96H55
Human Protein AtlasENSG00000278259
Peptide AtlasQ96H55
HPRD10107
IPIIPI00894163   IPI00386165   IPI00555820   IPI00062809   IPI00922352   
Protein Interaction databases
DIP (DOE-UCLA)Q96H55
IntAct (EBI)Q96H55
FunCoupENSG00000278259
BioGRIDMYO19
STRING (EMBL)MYO19
ZODIACMYO19
Ontologies - Pathways
QuickGOQ96H55
Ontology : AmiGOactin binding  ATP binding  cytoplasm  mitochondrial outer membrane  metabolic process  myosin complex  ATPase activity  myosin light chain binding  plus-end directed microfilament motor activity  
Ontology : EGO-EBIactin binding  ATP binding  cytoplasm  mitochondrial outer membrane  metabolic process  myosin complex  ATPase activity  myosin light chain binding  plus-end directed microfilament motor activity  
NDEx NetworkMYO19
Atlas of Cancer Signalling NetworkMYO19
Wikipedia pathwaysMYO19
Orthology - Evolution
OrthoDB80179
GeneTree (enSembl)ENSG00000278259
Phylogenetic Trees/Animal Genes : TreeFamMYO19
HOVERGENQ96H55
HOGENOMQ96H55
Homologs : HomoloGeneMYO19
Homology/Alignments : Family Browser (UCSC)MYO19
Gene fusions - Rearrangements
Fusion : MitelmanMYO19/STK32C [17q12/10q26.3]  
Fusion : MitelmanUSP22/MYO19 [17p11.2/17q12]  [t(17;17)(p11;q12)]  
Fusion: TCGAMYO19 17q12 STK32C 10q26.3 HNSC
Fusion: TCGAUSP22 17p11.2 MYO19 17q12 BRCA
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMYO19 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MYO19
dbVarMYO19
ClinVarMYO19
1000_GenomesMYO19 
Exome Variant ServerMYO19
ExAC (Exome Aggregation Consortium)MYO19 (select the gene name)
Genetic variants : HAPMAP80179
Genomic Variants (DGV)MYO19 [DGVbeta]
DECIPHER (Syndromes)17:34868917-34891305  ENSG00000278259
CONAN: Copy Number AnalysisMYO19 
Mutations
ICGC Data PortalMYO19 
TCGA Data PortalMYO19 
Broad Tumor PortalMYO19
OASIS PortalMYO19 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMYO19  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMYO19
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MYO19
DgiDB (Drug Gene Interaction Database)MYO19
DoCM (Curated mutations)MYO19 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MYO19 (select a term)
intoGenMYO19
Cancer3DMYO19(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenMYO19
Genetic Testing Registry MYO19
NextProtQ96H55 [Medical]
TSGene80179
GENETestsMYO19
Huge Navigator MYO19 [HugePedia]
snp3D : Map Gene to Disease80179
BioCentury BCIQMYO19
ClinGenMYO19
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80179
Chemical/Pharm GKB GenePA162396512
Clinical trialMYO19
Miscellaneous
canSAR (ICR)MYO19 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMYO19
EVEXMYO19
GoPubMedMYO19
iHOPMYO19
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 13:17:53 CET 2017

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