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MYO19 (myosin XIX)

Identity

Alias (NCBI)MYOHD1
HGNC (Hugo) MYO19
HGNC Alias symbFLJ22865
HGNC Previous nameMYOHD1
HGNC Previous namemyosin head domain containing 1
LocusID (NCBI) 80179
Atlas_Id 54483
Location 17q12  [Link to chromosome band 17q12]
Location_base_pair Starts at 36495755 and ends at 36535457 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
MYO19 (17q12) / MYO19 (17q12)MYO19 (17q12) / STK32C (10q26.3)MYO19 (17q12) / UTP4 (16q22.1)
SKA2 (17q22) / MYO19 (17q12)TRIM37 (17q22) / MYO19 (17q12)USP22 (17p11.2) / MYO19 (17q12)
MYO19 17q12 / STK32C 10q26.3USP22 17p11.2 / MYO19 17q12

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



Other Cancer prone implicated (Data extracted from papers in the Atlas) [ 1 ]
  Familial glioma


External links

 

Nomenclature
HGNC (Hugo)MYO19   26234
Cards
Entrez_Gene (NCBI)MYO19    myosin XIX
AliasesMYOHD1
GeneCards (Weizmann)MYO19
Ensembl hg19 (Hinxton)ENSG00000278259 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000278259 [Gene_View]  ENSG00000278259 [Sequence]  chr17:36495755-36535457 [Contig_View]  MYO19 [Vega]
ICGC DataPortalENSG00000278259
TCGA cBioPortalMYO19
AceView (NCBI)MYO19
Genatlas (Paris)MYO19
SOURCE (Princeton)MYO19
Genetics Home Reference (NIH)MYO19
Genomic and cartography
GoldenPath hg38 (UCSC)MYO19  -     chr17:36495755-36535457 -  17q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MYO19  -     17q12   [Description]    (hg19-Feb_2009)
GoldenPathMYO19 - 17q12 [CytoView hg19]  MYO19 - 17q12 [CytoView hg38]
ImmunoBaseENSG00000278259
Genome Data Viewer NCBIMYO19 [Mapview hg19]  
OMIM617379   
Gene and transcription
Genbank (Entrez)AA631248 AB209035 AK026518 AK293903 AK299802
RefSeq transcript (Entrez)NM_001033579 NM_001033580 NM_001163735 NM_025109
Consensus coding sequences : CCDS (NCBI)MYO19
Gene ExpressionMYO19 [ NCBI-GEO ]   MYO19 [ EBI - ARRAY_EXPRESS ]   MYO19 [ SEEK ]   MYO19 [ MEM ]
Gene Expression Viewer (FireBrowse)MYO19 [ Firebrowse - Broad ]
GenevisibleExpression of MYO19 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80179
GTEX Portal (Tissue expression)MYO19
Human Protein AtlasENSG00000278259-MYO19 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96H55   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96H55  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96H55
PhosPhoSitePlusQ96H55
Domaine pattern : Prosite (Expaxy)IQ (PS50096)    MYOSIN_MOTOR (PS51456)   
Domains : Interpro (EBI)IQ_motif_EF-hand-BS    Kinesin_motor_dom_sf    Myosin_head_motor_dom    MYSc_Myo19    P-loop_NTPase   
Domain families : Pfam (Sanger)Myosin_head (PF00063)   
Domain families : Pfam (NCBI)pfam00063   
Domain families : Smart (EMBL)MYSc (SM00242)  
Conserved Domain (NCBI)MYO19
SuperfamilyQ96H55
AlphaFold pdb e-kbQ96H55   
Human Protein Atlas [tissue]ENSG00000278259-MYO19 [tissue]
HPRD10107
Protein Interaction databases
DIP (DOE-UCLA)Q96H55
IntAct (EBI)Q96H55
BioGRIDMYO19
STRING (EMBL)MYO19
ZODIACMYO19
Ontologies - Pathways
QuickGOQ96H55
Ontology : AmiGOmicrofilament motor activity  actin binding  ATP binding  cytoplasm  mitochondrion  mitochondrial outer membrane  cytosol  actin filament organization  actin cytoskeleton  myosin complex  vesicle transport along actin filament  vesicle  myosin light chain binding  regulation of cytokinesis  mitochondrion migration along actin filament  actin filament binding  plus-end directed microfilament motor activity  regulation of mitochondrial fission  ATP hydrolysis activity  
Ontology : EGO-EBImicrofilament motor activity  actin binding  ATP binding  cytoplasm  mitochondrion  mitochondrial outer membrane  cytosol  actin filament organization  actin cytoskeleton  myosin complex  vesicle transport along actin filament  vesicle  myosin light chain binding  regulation of cytokinesis  mitochondrion migration along actin filament  actin filament binding  plus-end directed microfilament motor activity  regulation of mitochondrial fission  ATP hydrolysis activity  
NDEx NetworkMYO19
Atlas of Cancer Signalling NetworkMYO19
Wikipedia pathwaysMYO19
Orthology - Evolution
OrthoDB80179
GeneTree (enSembl)ENSG00000278259
Phylogenetic Trees/Animal Genes : TreeFamMYO19
Homologs : HomoloGeneMYO19
Homology/Alignments : Family Browser (UCSC)MYO19
Gene fusions - Rearrangements
Fusion : MitelmanMYO19/STK32C [17q12/10q26.3]  
Fusion : MitelmanUSP22/MYO19 [17p11.2/17q12]  
Fusion : QuiverMYO19
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMYO19 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MYO19
dbVarMYO19
ClinVarMYO19
MonarchMYO19
1000_GenomesMYO19 
Exome Variant ServerMYO19
GNOMAD BrowserENSG00000278259
Varsome BrowserMYO19
ACMGMYO19 variants
VarityQ96H55
Genomic Variants (DGV)MYO19 [DGVbeta]
DECIPHERMYO19 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMYO19 
Mutations
ICGC Data PortalMYO19 
TCGA Data PortalMYO19 
Broad Tumor PortalMYO19
OASIS PortalMYO19 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMYO19
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaMYO19
DgiDB (Drug Gene Interaction Database)MYO19
DoCM (Curated mutations)MYO19
CIViC (Clinical Interpretations of Variants in Cancer)MYO19
Cancer3DMYO19
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM617379   
Orphanet
DisGeNETMYO19
MedgenMYO19
Genetic Testing Registry MYO19
NextProtQ96H55 [Medical]
GENETestsMYO19
Target ValidationMYO19
Huge Navigator MYO19 [HugePedia]
ClinGenMYO19
Clinical trials, drugs, therapy
MyCancerGenomeMYO19
Protein Interactions : CTDMYO19
Pharm GKB GenePA162396512
PharosQ96H55
Clinical trialMYO19
Miscellaneous
canSAR (ICR)MYO19
HarmonizomeMYO19
DataMed IndexMYO19
Probes
Litterature
PubMed26 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXMYO19
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:21:49 CEST 2021

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