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MYO1A (myosin IA)

Identity

Other namesBBMI
DFNA48
MIHC
MYHL
HGNC (Hugo) MYO1A
LocusID (NCBI) 4640
Location 12q13.3
Location_base_pair Starts at 57422301 and ends at 57444549 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)MYO1A   7595
Entrez_Gene (NCBI)MYO1A  4640  myosin IA
Cards
GeneCards (Weizmann)MYO1A
Ensembl (Hinxton)ENSG00000166866 [Gene_View]  chr12:57422301-57444549 [Contig_View]  MYO1A [Vega]
AceView (NCBI)MYO1A
Genatlas (Paris)MYO1A
SOURCE (Stanford)NM_001256041 NM_005379
Genomic and cartography
GoldenPath (UCSC)MYO1A  -  12q13.3   chr12:57422301-57444549 -  12q13.3   [Description]    (hg19-Feb_2009)
EnsemblMYO1A - 12q13.3 [CytoView]
Mapping of homologs : NCBIMYO1A [Mapview]
OMIM601478   607841   
Gene and transcription
Genbank (Entrez)AF009961 AF105424 AF127026 AK300381 AK312431
RefSeq transcript (SRS)NM_001256041 NM_005379
RefSeq transcript (Entrez)NM_001256041 NM_005379
RefSeq genomic (SRS)AC_000144 NC_000012 NC_018923 NG_012104 NT_029419 NW_001838059 NW_004078075
RefSeq genomic (Entrez)AC_000144 NC_000012 NC_018923 NG_012104 NT_029419 NW_001838059 NW_004078075
Consensus coding sequences : CCDS (NCBI)MYO1A
Cluster EST : UnigeneHs.5394 [ SRS ] Hs.5394 [ NCBI ]
CGAP (NCI)Hs.5394
Alternative Splicing : Fast-db (Paris)GSHG0007564
Alternative Splicing GalleryENSG00000166866
Gene ExpressionMYO1A [ NCBI-GEO ]   MYO1A [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UBC5 (SRS) Q9UBC5 (Uniprot)
NextProtQ9UBC5
With graphics : InterProQ9UBC5
Splice isoforms : SwissVarQ9UBC5(Swissvar)
Domaine pattern : Prosite (SRS)IQ (PS50096)   
Domaine pattern : Prosite (Expaxy)IQ (PS50096)   
Domains : Interpro (SRS)IQ_motif_EF-hand-BS    Myosin_head_motor_dom    Myosin_tail_2   
Domains : Interpro (EBI)IQ_motif_EF-hand-BS    Myosin_head_motor_dom    Myosin_tail_2   
Related proteins : CluSTrQ9UBC5
Domain families : Pfam (SRS)IQ (PF00612)    Myosin_head (PF00063)    Myosin_TH1 (PF06017)   
Domain families : Pfam (Sanger)IQ (PF00612)    Myosin_head (PF00063)    Myosin_TH1 (PF06017)   
Domain families : Pfam (NCBI)pfam00612    pfam00063    pfam06017   
Domain families : Smart (EMBL)IQ (SM00015)  MYSc (SM00242)  
DMDM4640
Blocks (Seattle)Q9UBC5
Human Protein AtlasENSG00000166866
HPRD08371
IPIIPI00294386   IPI01011230   IPI01024989   IPI01025342   IPI00853575   
Protein Interaction databases
DIP (DOE-UCLA)Q9UBC5
IntAct (EBI)Q9UBC5
FunCoupENSG00000166866
REACTOMEMYO1A
Protein Interaction Database4640
BioGRIDMYO1A
InParanoidQ9UBC5
Interologous Interaction database Q9UBC5
IntegromeDBMYO1A
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)MYO1A
SNP (GeneSNP Utah)MYO1A
SNP : HGBaseMYO1A
Genetic variants : HAPMAPMYO1A
Somatic Mutations in Cancer : COSMICMYO1A 
CONAN: Copy Number AnalysisMYO1A 
Mutations and Diseases : HGMDMYO1A
OMIM601478    607841   
GENETests601478    607841   
Disease Genetic AssociationMYO1A
Huge Navigator MYO1A [HugePedia]  MYO1A [HugeCancerGEM]
Genomic VariantsMYO1A  MYO1A [DGVbeta]
snp3D : Map Gene to Disease4640
General knowledge
Homologs : HomoloGeneMYO1A
Homology/Alignments : Family Browser (UCSC)MYO1A
Phylogenetic Trees/Animal Genes : TreeFamMYO1A
Chemical/Protein Interactions : CTD4640
Chemical/Pharm GKB GenePA31397
Clinical trialMYO1A
Cancer Resource (Charite)ENSG00000166866
Ontology : AmiGOmotor activity  actin binding  calmodulin binding  ATP binding  cytoplasm  microvillus  brush border  sensory perception of sound  basal plasma membrane  basolateral plasma membrane  apical plasma membrane  lateral plasma membrane  myosin complex  microvillus assembly  cortical actin cytoskeleton  filamentous actin  vesicle localization  
Ontology : EGO-EBImotor activity  actin binding  calmodulin binding  ATP binding  cytoplasm  microvillus  brush border  sensory perception of sound  basal plasma membrane  basolateral plasma membrane  apical plasma membrane  lateral plasma membrane  myosin complex  microvillus assembly  cortical actin cytoskeleton  filamentous actin  vesicle localization  
Other databases
Probes
Litterature
PubMed25 Pubmed reference(s) in Entrez
PubGeneMYO1A
iHOPMYO1A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:43:12 CEST 2013
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