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MYO1G (myosin IG)

Identity

Alias_symbol (synonym)HA-2
Other aliasHA2
HLA-HA2
MHAG
HGNC (Hugo) MYO1G
LocusID (NCBI) 64005
Atlas_Id 70631
Location 7p13  [Link to chromosome band 7p13]
Location_base_pair Starts at 44962661 and ends at 44979105 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MYO1G   13880
Cards
Entrez_Gene (NCBI)MYO1G  64005  myosin IG
AliasesHA2; HLA-HA2; MHAG
GeneCards (Weizmann)MYO1G
Ensembl hg19 (Hinxton)ENSG00000136286 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000136286 [Gene_View]  chr7:44962661-44979105 [Contig_View]  MYO1G [Vega]
ICGC DataPortalENSG00000136286
TCGA cBioPortalMYO1G
AceView (NCBI)MYO1G
Genatlas (Paris)MYO1G
WikiGenes64005
SOURCE (Princeton)MYO1G
Genetics Home Reference (NIH)MYO1G
Genomic and cartography
GoldenPath hg38 (UCSC)MYO1G  -     chr7:44962661-44979105 -  7p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MYO1G  -     7p13   [Description]    (hg19-Feb_2009)
EnsemblMYO1G - 7p13 [CytoView hg19]  MYO1G - 7p13 [CytoView hg38]
Mapping of homologs : NCBIMYO1G [Mapview hg19]  MYO1G [Mapview hg38]
OMIM600642   
Gene and transcription
Genbank (Entrez)AA651942 AB290179 AF380932 AF380933 AK074050
RefSeq transcript (Entrez)NM_033054
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MYO1G
Cluster EST : UnigeneHs.37617 [ NCBI ]
CGAP (NCI)Hs.37617
Alternative Splicing GalleryENSG00000136286
Gene ExpressionMYO1G [ NCBI-GEO ]   MYO1G [ EBI - ARRAY_EXPRESS ]   MYO1G [ SEEK ]   MYO1G [ MEM ]
Gene Expression Viewer (FireBrowse)MYO1G [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64005
GTEX Portal (Tissue expression)MYO1G
Human Protein AtlasENSG00000136286-MYO1G [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtB0I1T2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtB0I1T2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProB0I1T2
Splice isoforms : SwissVarB0I1T2
PhosPhoSitePlusB0I1T2
Domaine pattern : Prosite (Expaxy)MYOSIN_MOTOR (PS51456)    TH1 (PS51757)   
Domains : Interpro (EBI)Myosin_head_motor_dom    Myosin_TH1    P-loop_NTPase   
Domain families : Pfam (Sanger)Myosin_head (PF00063)    Myosin_TH1 (PF06017)   
Domain families : Pfam (NCBI)pfam00063    pfam06017   
Domain families : Smart (EMBL)MYSc (SM00242)  
Conserved Domain (NCBI)MYO1G
DMDM Disease mutations64005
Blocks (Seattle)MYO1G
SuperfamilyB0I1T2
Human Protein Atlas [tissue]ENSG00000136286-MYO1G [tissue]
Peptide AtlasB0I1T2
HPRD17622
IPIIPI00420004   IPI00895790   IPI00895883   IPI00895957   IPI00945142   IPI00945499   
Protein Interaction databases
DIP (DOE-UCLA)B0I1T2
IntAct (EBI)B0I1T2
FunCoupENSG00000136286
BioGRIDMYO1G
STRING (EMBL)MYO1G
ZODIACMYO1G
Ontologies - Pathways
QuickGOB0I1T2
Ontology : AmiGOphagocytic cup  T cell mediated immunity  motor activity  actin binding  calmodulin binding  ATP binding  phosphatidylinositol-4,5-bisphosphate binding  phosphatidylinositol-3,4,5-trisphosphate binding  plasma membrane  microvillus  exocytosis  membrane  myosin complex  lamellipodium  filopodium  leading edge membrane  cell-substrate adhesion  Fc-gamma receptor signaling pathway involved in phagocytosis  phosphatidylinositol-3,4-bisphosphate binding  extracellular exosome  cell gliding  T cell migration  
Ontology : EGO-EBIphagocytic cup  T cell mediated immunity  motor activity  actin binding  calmodulin binding  ATP binding  phosphatidylinositol-4,5-bisphosphate binding  phosphatidylinositol-3,4,5-trisphosphate binding  plasma membrane  microvillus  exocytosis  membrane  myosin complex  lamellipodium  filopodium  leading edge membrane  cell-substrate adhesion  Fc-gamma receptor signaling pathway involved in phagocytosis  phosphatidylinositol-3,4-bisphosphate binding  extracellular exosome  cell gliding  T cell migration  
NDEx NetworkMYO1G
Atlas of Cancer Signalling NetworkMYO1G
Wikipedia pathwaysMYO1G
Orthology - Evolution
OrthoDB64005
GeneTree (enSembl)ENSG00000136286
Phylogenetic Trees/Animal Genes : TreeFamMYO1G
HOVERGENB0I1T2
HOGENOMB0I1T2
Homologs : HomoloGeneMYO1G
Homology/Alignments : Family Browser (UCSC)MYO1G
Gene fusions - Rearrangements
Fusion: Tumor Portal MYO1G
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMYO1G [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MYO1G
dbVarMYO1G
ClinVarMYO1G
1000_GenomesMYO1G 
Exome Variant ServerMYO1G
ExAC (Exome Aggregation Consortium)ENSG00000136286
GNOMAD BrowserENSG00000136286
Genetic variants : HAPMAP64005
Genomic Variants (DGV)MYO1G [DGVbeta]
DECIPHERMYO1G [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMYO1G 
Mutations
ICGC Data PortalMYO1G 
TCGA Data PortalMYO1G 
Broad Tumor PortalMYO1G
OASIS PortalMYO1G [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMYO1G  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMYO1G
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MYO1G
DgiDB (Drug Gene Interaction Database)MYO1G
DoCM (Curated mutations)MYO1G (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MYO1G (select a term)
intoGenMYO1G
Cancer3DMYO1G(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM600642   
Orphanet
MedgenMYO1G
Genetic Testing Registry MYO1G
NextProtB0I1T2 [Medical]
TSGene64005
GENETestsMYO1G
Target ValidationMYO1G
Huge Navigator MYO1G [HugePedia]
snp3D : Map Gene to Disease64005
BioCentury BCIQMYO1G
ClinGenMYO1G
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD64005
Chemical/Pharm GKB GenePA31403
Clinical trialMYO1G
Miscellaneous
canSAR (ICR)MYO1G (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMYO1G
EVEXMYO1G
GoPubMedMYO1G
iHOPMYO1G
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:18:23 CET 2017

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