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MYO1H (myosin IH)

Identity

Alias_symbol (synonym)FLJ37587
Other alias-
HGNC (Hugo) MYO1H
LocusID (NCBI) 283446
Atlas_Id 70632
Location 12q24.11  [Link to chromosome band 12q24]
Location_base_pair Starts at 109388719 and ends at 109448371 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
SFSWAP (12q24.33) / MYO1H (12q24.11)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MYO1H   13879
Cards
Entrez_Gene (NCBI)MYO1H  283446  myosin IH
Aliases
GeneCards (Weizmann)MYO1H
Ensembl hg19 (Hinxton)ENSG00000174527 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000174527 [Gene_View]  chr12:109388719-109448371 [Contig_View]  MYO1H [Vega]
ICGC DataPortalENSG00000174527
TCGA cBioPortalMYO1H
AceView (NCBI)MYO1H
Genatlas (Paris)MYO1H
WikiGenes283446
SOURCE (Princeton)MYO1H
Genetics Home Reference (NIH)MYO1H
Genomic and cartography
GoldenPath hg38 (UCSC)MYO1H  -     chr12:109388719-109448371 +  12q24.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MYO1H  -     12q24.11   [Description]    (hg19-Feb_2009)
EnsemblMYO1H - 12q24.11 [CytoView hg19]  MYO1H - 12q24.11 [CytoView hg38]
Mapping of homologs : NCBIMYO1H [Mapview hg19]  MYO1H [Mapview hg38]
OMIM614636   
Gene and transcription
Genbank (Entrez)AK094906 AK298093 BU616423 CR747253 DB339279
RefSeq transcript (Entrez)NM_001101421 NM_173597
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MYO1H
Cluster EST : UnigeneHs.512008 [ NCBI ]
CGAP (NCI)Hs.512008
Alternative Splicing GalleryENSG00000174527
Gene ExpressionMYO1H [ NCBI-GEO ]   MYO1H [ EBI - ARRAY_EXPRESS ]   MYO1H [ SEEK ]   MYO1H [ MEM ]
Gene Expression Viewer (FireBrowse)MYO1H [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)283446
GTEX Portal (Tissue expression)MYO1H
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N1T3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N1T3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N1T3
Splice isoforms : SwissVarQ8N1T3
PhosPhoSitePlusQ8N1T3
Domaine pattern : Prosite (Expaxy)IQ (PS50096)    MYOSIN_MOTOR (PS51456)    TH1 (PS51757)   
Domains : Interpro (EBI)IQ_motif_EF-hand-BS    Myosin_head_motor_dom    Myosin_TH1    P-loop_NTPase   
Domain families : Pfam (Sanger)Myosin_head (PF00063)    Myosin_TH1 (PF06017)   
Domain families : Pfam (NCBI)pfam00063    pfam06017   
Domain families : Smart (EMBL)MYSc (SM00242)  
Conserved Domain (NCBI)MYO1H
DMDM Disease mutations283446
Blocks (Seattle)MYO1H
SuperfamilyQ8N1T3
Human Protein AtlasENSG00000174527
Peptide AtlasQ8N1T3
HPRD08227
IPIIPI00855818   IPI00893116   
Protein Interaction databases
DIP (DOE-UCLA)Q8N1T3
IntAct (EBI)Q8N1T3
FunCoupENSG00000174527
BioGRIDMYO1H
STRING (EMBL)MYO1H
ZODIACMYO1H
Ontologies - Pathways
QuickGOQ8N1T3
Ontology : AmiGOmotor activity  actin binding  ATP binding  myosin complex  
Ontology : EGO-EBImotor activity  actin binding  ATP binding  myosin complex  
NDEx NetworkMYO1H
Atlas of Cancer Signalling NetworkMYO1H
Wikipedia pathwaysMYO1H
Orthology - Evolution
OrthoDB283446
GeneTree (enSembl)ENSG00000174527
Phylogenetic Trees/Animal Genes : TreeFamMYO1H
HOVERGENQ8N1T3
HOGENOMQ8N1T3
Homologs : HomoloGeneMYO1H
Homology/Alignments : Family Browser (UCSC)MYO1H
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMYO1H [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MYO1H
dbVarMYO1H
ClinVarMYO1H
1000_GenomesMYO1H 
Exome Variant ServerMYO1H
ExAC (Exome Aggregation Consortium)MYO1H (select the gene name)
Genetic variants : HAPMAP283446
Genomic Variants (DGV)MYO1H [DGVbeta]
DECIPHERMYO1H [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMYO1H 
Mutations
ICGC Data PortalMYO1H 
TCGA Data PortalMYO1H 
Broad Tumor PortalMYO1H
OASIS PortalMYO1H [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMYO1H  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMYO1H
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MYO1H
DgiDB (Drug Gene Interaction Database)MYO1H
DoCM (Curated mutations)MYO1H (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MYO1H (select a term)
intoGenMYO1H
Cancer3DMYO1H(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614636   
Orphanet
MedgenMYO1H
Genetic Testing Registry MYO1H
NextProtQ8N1T3 [Medical]
TSGene283446
GENETestsMYO1H
Target ValidationMYO1H
Huge Navigator MYO1H [HugePedia]
snp3D : Map Gene to Disease283446
BioCentury BCIQMYO1H
ClinGenMYO1H
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283446
Chemical/Pharm GKB GenePA31404
Clinical trialMYO1H
Miscellaneous
canSAR (ICR)MYO1H (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMYO1H
EVEXMYO1H
GoPubMedMYO1H
iHOPMYO1H
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:32:05 CEST 2017

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