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MYOM2 (myomesin 2)

Identity

Alias_namesmyomesin (M-protein) 2 (165kD)
myomesin (M-protein) 2, 165kDa
Other aliasTTNAP
HGNC (Hugo) MYOM2
LocusID (NCBI) 9172
Atlas_Id 41484
Location 8p23.3  [Link to chromosome band 8p23]
Location_base_pair Starts at 1993158 and ends at 2093380 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
HNRNPK (9q21.32) / MYOM2 (8p23.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MYOM2   7614
Cards
Entrez_Gene (NCBI)MYOM2  9172  myomesin 2
AliasesTTNAP
GeneCards (Weizmann)MYOM2
Ensembl hg19 (Hinxton)ENSG00000036448 [Gene_View]  chr8:1993158-2093380 [Contig_View]  MYOM2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000036448 [Gene_View]  chr8:1993158-2093380 [Contig_View]  MYOM2 [Vega]
ICGC DataPortalENSG00000036448
TCGA cBioPortalMYOM2
AceView (NCBI)MYOM2
Genatlas (Paris)MYOM2
WikiGenes9172
SOURCE (Princeton)MYOM2
Genetics Home Reference (NIH)MYOM2
Genomic and cartography
GoldenPath hg19 (UCSC)MYOM2  -     chr8:1993158-2093380 +  8p23.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MYOM2  -     8p23.3   [Description]    (hg38-Dec_2013)
EnsemblMYOM2 - 8p23.3 [CytoView hg19]  MYOM2 - 8p23.3 [CytoView hg38]
Mapping of homologs : NCBIMYOM2 [Mapview hg19]  MYOM2 [Mapview hg38]
OMIM603509   
Gene and transcription
Genbank (Entrez)AJ708170 AK297890 AL596730 BC052969 BM720057
RefSeq transcript (Entrez)NM_003970
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_023736 NT_187576 NW_004929335
Consensus coding sequences : CCDS (NCBI)MYOM2
Cluster EST : UnigeneHs.443683 [ NCBI ]
CGAP (NCI)Hs.443683
Alternative Splicing GalleryENSG00000036448
Gene ExpressionMYOM2 [ NCBI-GEO ]   MYOM2 [ EBI - ARRAY_EXPRESS ]   MYOM2 [ SEEK ]   MYOM2 [ MEM ]
Gene Expression Viewer (FireBrowse)MYOM2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9172
GTEX Portal (Tissue expression)MYOM2
Protein : pattern, domain, 3D structure
UniProt/SwissProtP54296   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP54296  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP54296
Splice isoforms : SwissVarP54296
PhosPhoSitePlusP54296
Domaine pattern : Prosite (Expaxy)FN3 (PS50853)    IG_LIKE (PS50835)   
Domains : Interpro (EBI)FN3_dom    Ig-like_dom    Ig-like_fold    Ig_I-set    Ig_sub    Ig_sub2   
Domain families : Pfam (Sanger)fn3 (PF00041)    I-set (PF07679)   
Domain families : Pfam (NCBI)pfam00041    pfam07679   
Domain families : Smart (EMBL)FN3 (SM00060)  IG (SM00409)  IGc2 (SM00408)  
Conserved Domain (NCBI)MYOM2
DMDM Disease mutations9172
Blocks (Seattle)MYOM2
SuperfamilyP54296
Human Protein AtlasENSG00000036448
Peptide AtlasP54296
HPRD04619
IPIIPI00005587   IPI00979142   
Protein Interaction databases
DIP (DOE-UCLA)P54296
IntAct (EBI)P54296
FunCoupENSG00000036448
BioGRIDMYOM2
STRING (EMBL)MYOM2
ZODIACMYOM2
Ontologies - Pathways
QuickGOP54296
Ontology : AmiGOprotein binding  mitochondrion  muscle contraction  structural constituent of muscle  M band  myosin filament  
Ontology : EGO-EBIprotein binding  mitochondrion  muscle contraction  structural constituent of muscle  M band  myosin filament  
NDEx NetworkMYOM2
Atlas of Cancer Signalling NetworkMYOM2
Wikipedia pathwaysMYOM2
Orthology - Evolution
OrthoDB9172
GeneTree (enSembl)ENSG00000036448
Phylogenetic Trees/Animal Genes : TreeFamMYOM2
HOVERGENP54296
HOGENOMP54296
Homologs : HomoloGeneMYOM2
Homology/Alignments : Family Browser (UCSC)MYOM2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMYOM2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MYOM2
dbVarMYOM2
ClinVarMYOM2
1000_GenomesMYOM2 
Exome Variant ServerMYOM2
ExAC (Exome Aggregation Consortium)MYOM2 (select the gene name)
Genetic variants : HAPMAP9172
Genomic Variants (DGV)MYOM2 [DGVbeta]
DECIPHER (Syndromes)8:1993158-2093380  ENSG00000036448
CONAN: Copy Number AnalysisMYOM2 
Mutations
ICGC Data PortalMYOM2 
TCGA Data PortalMYOM2 
Broad Tumor PortalMYOM2
OASIS PortalMYOM2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMYOM2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMYOM2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MYOM2
DgiDB (Drug Gene Interaction Database)MYOM2
DoCM (Curated mutations)MYOM2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MYOM2 (select a term)
intoGenMYOM2
Cancer3DMYOM2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603509   
Orphanet
MedgenMYOM2
Genetic Testing Registry MYOM2
NextProtP54296 [Medical]
TSGene9172
GENETestsMYOM2
Huge Navigator MYOM2 [HugePedia]
snp3D : Map Gene to Disease9172
BioCentury BCIQMYOM2
ClinGenMYOM2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9172
Chemical/Pharm GKB GenePA31419
Clinical trialMYOM2
Miscellaneous
canSAR (ICR)MYOM2 (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMYOM2
EVEXMYOM2
GoPubMedMYOM2
iHOPMYOM2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:11:31 CEST 2017

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