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MYOZ1 (myozenin 1)

Identity

Alias_namesMYOZ
myozenin
Alias_symbol (synonym)FATZ
CS-2
Other alias
HGNC (Hugo) MYOZ1
LocusID (NCBI) 58529
Atlas_Id 70637
Location 10q22.2  [Link to chromosome band 10q22]
Location_base_pair Starts at 73631612 and ends at 73641757 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
SYNPO2L (10q22.2) / MYOZ1 (10q22.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MYOZ1   13752
Cards
Entrez_Gene (NCBI)MYOZ1  58529  myozenin 1
AliasesCS-2; FATZ; MYOZ
GeneCards (Weizmann)MYOZ1
Ensembl hg19 (Hinxton)ENSG00000177791 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000177791 [Gene_View]  chr10:73631612-73641757 [Contig_View]  MYOZ1 [Vega]
ICGC DataPortalENSG00000177791
TCGA cBioPortalMYOZ1
AceView (NCBI)MYOZ1
Genatlas (Paris)MYOZ1
WikiGenes58529
SOURCE (Princeton)MYOZ1
Genetics Home Reference (NIH)MYOZ1
Genomic and cartography
GoldenPath hg38 (UCSC)MYOZ1  -     chr10:73631612-73641757 -  10q22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MYOZ1  -     10q22.2   [Description]    (hg19-Feb_2009)
EnsemblMYOZ1 - 10q22.2 [CytoView hg19]  MYOZ1 - 10q22.2 [CytoView hg38]
Mapping of homologs : NCBIMYOZ1 [Mapview hg19]  MYOZ1 [Mapview hg38]
OMIM605603   
Gene and transcription
Genbank (Entrez)AA176752 AF240633 AJ278124 AK300683 AK308200
RefSeq transcript (Entrez)NM_021245
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MYOZ1
Cluster EST : UnigeneHs.238756 [ NCBI ]
CGAP (NCI)Hs.238756
Alternative Splicing GalleryENSG00000177791
Gene ExpressionMYOZ1 [ NCBI-GEO ]   MYOZ1 [ EBI - ARRAY_EXPRESS ]   MYOZ1 [ SEEK ]   MYOZ1 [ MEM ]
Gene Expression Viewer (FireBrowse)MYOZ1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)58529
GTEX Portal (Tissue expression)MYOZ1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NP98   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NP98  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NP98
Splice isoforms : SwissVarQ9NP98
PhosPhoSitePlusQ9NP98
Domains : Interpro (EBI)MYOZ   
Domain families : Pfam (Sanger)Calsarcin (PF05556)   
Domain families : Pfam (NCBI)pfam05556   
Conserved Domain (NCBI)MYOZ1
DMDM Disease mutations58529
Blocks (Seattle)MYOZ1
SuperfamilyQ9NP98
Human Protein AtlasENSG00000177791
Peptide AtlasQ9NP98
HPRD05725
IPIIPI00300502   IPI00909860   
Protein Interaction databases
DIP (DOE-UCLA)Q9NP98
IntAct (EBI)Q9NP98
FunCoupENSG00000177791
BioGRIDMYOZ1
STRING (EMBL)MYOZ1
ZODIACMYOZ1
Ontologies - Pathways
QuickGOQ9NP98
Ontology : AmiGOactin binding  protein binding  nucleus  actin cytoskeleton  Z disc  myofibril assembly  pseudopodium  telethonin binding  FATZ binding  
Ontology : EGO-EBIactin binding  protein binding  nucleus  actin cytoskeleton  Z disc  myofibril assembly  pseudopodium  telethonin binding  FATZ binding  
NDEx NetworkMYOZ1
Atlas of Cancer Signalling NetworkMYOZ1
Wikipedia pathwaysMYOZ1
Orthology - Evolution
OrthoDB58529
GeneTree (enSembl)ENSG00000177791
Phylogenetic Trees/Animal Genes : TreeFamMYOZ1
HOVERGENQ9NP98
HOGENOMQ9NP98
Homologs : HomoloGeneMYOZ1
Homology/Alignments : Family Browser (UCSC)MYOZ1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMYOZ1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MYOZ1
dbVarMYOZ1
ClinVarMYOZ1
1000_GenomesMYOZ1 
Exome Variant ServerMYOZ1
ExAC (Exome Aggregation Consortium)MYOZ1 (select the gene name)
Genetic variants : HAPMAP58529
Genomic Variants (DGV)MYOZ1 [DGVbeta]
DECIPHERMYOZ1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMYOZ1 
Mutations
ICGC Data PortalMYOZ1 
TCGA Data PortalMYOZ1 
Broad Tumor PortalMYOZ1
OASIS PortalMYOZ1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMYOZ1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMYOZ1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)Leiden Muscular Dystrophy pages
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MYOZ1
DgiDB (Drug Gene Interaction Database)MYOZ1
DoCM (Curated mutations)MYOZ1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MYOZ1 (select a term)
intoGenMYOZ1
Cancer3DMYOZ1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605603   
Orphanet
MedgenMYOZ1
Genetic Testing Registry MYOZ1
NextProtQ9NP98 [Medical]
TSGene58529
GENETestsMYOZ1
Target ValidationMYOZ1
Huge Navigator MYOZ1 [HugePedia]
snp3D : Map Gene to Disease58529
BioCentury BCIQMYOZ1
ClinGenMYOZ1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD58529
Chemical/Pharm GKB GenePA31420
Clinical trialMYOZ1
Miscellaneous
canSAR (ICR)MYOZ1 (select the gene name)
Probes
Litterature
PubMed22 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMYOZ1
EVEXMYOZ1
GoPubMedMYOZ1
iHOPMYOZ1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:32:06 CEST 2017

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