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MYOZ2 (myozenin 2)

Identity

Other namesC4orf5
CMH16
CS-1
HGNC (Hugo) MYOZ2
LocusID (NCBI) 51778
Location 4q26
Location_base_pair Starts at 120056939 and ends at 120108944 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)MYOZ2   1330
Cards
Entrez_Gene (NCBI)MYOZ2  51778  myozenin 2
GeneCards (Weizmann)MYOZ2
Ensembl (Hinxton)ENSG00000172399 [Gene_View]  chr4:120056939-120108944 [Contig_View]  MYOZ2 [Vega]
ICGC DataPortalENSG00000172399
cBioPortalMYOZ2
AceView (NCBI)MYOZ2
Genatlas (Paris)MYOZ2
WikiGenes51778
SOURCE (Princeton)NM_016599
Genomic and cartography
GoldenPath (UCSC)MYOZ2  -  4q26   chr4:120056939-120108944 +  4q26   [Description]    (hg19-Feb_2009)
EnsemblMYOZ2 - 4q26 [CytoView]
Mapping of homologs : NCBIMYOZ2 [Mapview]
OMIM605602   613838   
Gene and transcription
Genbank (Entrez)AF007160 AF249873 AJ252149 AK313856 AY013295
RefSeq transcript (Entrez)NM_016599
RefSeq genomic (Entrez)AC_000136 NC_000004 NC_018915 NG_029747 NT_016354 NW_001838920 NW_004929320
Consensus coding sequences : CCDS (NCBI)MYOZ2
Cluster EST : UnigeneHs.732122 [ NCBI ]
CGAP (NCI)Hs.732122
Alternative Splicing : Fast-db (Paris)GSHG0022809
Alternative Splicing GalleryENSG00000172399
Gene ExpressionMYOZ2 [ NCBI-GEO ]     MYOZ2 [ SEEK ]   MYOZ2 [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NPC6 (Uniprot)
NextProtQ9NPC6  [Medical]
With graphics : InterProQ9NPC6
Splice isoforms : SwissVarQ9NPC6 (Swissvar)
Domains : Interpro (EBI)MYOZ [organisation]  
Related proteins : CluSTrQ9NPC6
Domain families : Pfam (Sanger)Calsarcin (PF05556)   
Domain families : Pfam (NCBI)pfam05556   
DMDM Disease mutations51778
Blocks (Seattle)Q9NPC6
Human Protein AtlasENSG00000172399 [gene] [tissue] [antibody] [cell] [cancer]
Peptide AtlasQ9NPC6
HPRD05724
IPIIPI00387020   IPI00981841   
Protein Interaction databases
DIP (DOE-UCLA)Q9NPC6
IntAct (EBI)Q9NPC6
FunCoupENSG00000172399
BioGRIDMYOZ2
InParanoidQ9NPC6
Interologous Interaction database Q9NPC6
IntegromeDBMYOZ2
STRING (EMBL)MYOZ2
Ontologies - Pathways
Ontology : AmiGOactin binding  protein binding  biological_process  actin cytoskeleton  sarcomere  Z disc  protein phosphatase 2B binding  telethonin binding  
Ontology : EGO-EBIactin binding  protein binding  biological_process  actin cytoskeleton  sarcomere  Z disc  protein phosphatase 2B binding  telethonin binding  
Protein Interaction DatabaseMYOZ2
Wikipedia pathwaysMYOZ2
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)MYOZ2
snp3D : Map Gene to Disease51778
SNP (GeneSNP Utah)MYOZ2
SNP : HGBaseMYOZ2
Genetic variants : HAPMAPMYOZ2
Exome VariantMYOZ2
1000_GenomesMYOZ2 
ICGC programENSG00000172399 
Somatic Mutations in Cancer : COSMICMYOZ2 
CONAN: Copy Number AnalysisMYOZ2 
Mutations and Diseases : HGMDMYOZ2
Genomic VariantsMYOZ2  MYOZ2 [DGVbeta]
dbVarMYOZ2
ClinVarMYOZ2
Pred. of missensesPolyPhen-2  SIFT(SG)  SIFT(JCVI)  Align-GVGD  MutAssessor  Mutanalyser  
Pred. splicesGeneSplicer  Human Splicing Finder  MaxEntScan  
Diseases
OMIM605602    613838   
MedgenMYOZ2
GENETestsMYOZ2
Disease Genetic AssociationMYOZ2
Huge Navigator MYOZ2 [HugePedia]  MYOZ2 [HugeCancerGEM]
General knowledge
Homologs : HomoloGeneMYOZ2
Homology/Alignments : Family Browser (UCSC)MYOZ2
Phylogenetic Trees/Animal Genes : TreeFamMYOZ2
Chemical/Protein Interactions : CTD51778
Chemical/Pharm GKB GenePA31421
Clinical trialMYOZ2
Cancer Resource (Charite)ENSG00000172399
Other databases
Probes
Litterature
PubMed25 Pubmed reference(s) in Entrez
CoreMineMYOZ2
iHOPMYOZ2
OncoSearchMYOZ2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jul 30 14:07:01 CEST 2014

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