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MYRF (myelin regulatory factor)

Identity

Alias_namesC11orf9
chromosome 11 open reading frame 9
Alias_symbol (synonym)Ndt80
pqn-47
MRF
Other alias
HGNC (Hugo) MYRF
LocusID (NCBI) 745
Atlas_Id 70639
Location 11q12.2  [Link to chromosome band 11q12]
Location_base_pair Starts at 61520109 and ends at 61555990 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MYRF   1181
Cards
Entrez_Gene (NCBI)MYRF  745  myelin regulatory factor
AliasesC11orf9; MRF; Ndt80; pqn-47
GeneCards (Weizmann)MYRF
Ensembl hg19 (Hinxton)ENSG00000124920 [Gene_View]  chr11:61520109-61555990 [Contig_View]  MYRF [Vega]
Ensembl hg38 (Hinxton)ENSG00000124920 [Gene_View]  chr11:61520109-61555990 [Contig_View]  MYRF [Vega]
ICGC DataPortalENSG00000124920
TCGA cBioPortalMYRF
AceView (NCBI)MYRF
Genatlas (Paris)MYRF
WikiGenes745
SOURCE (Princeton)MYRF
Genetics Home Reference (NIH)MYRF
Genomic and cartography
GoldenPath hg19 (UCSC)MYRF  -     chr11:61520109-61555990 +  11q12.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MYRF  -     11q12.2   [Description]    (hg38-Dec_2013)
EnsemblMYRF - 11q12.2 [CytoView hg19]  MYRF - 11q12.2 [CytoView hg38]
Mapping of homologs : NCBIMYRF [Mapview hg19]  MYRF [Mapview hg38]
OMIM608329   
Gene and transcription
Genbank (Entrez)AB023171 AF038536 AF086762 AI366703 AK295013
RefSeq transcript (Entrez)NM_001127392 NM_013279
RefSeq genomic (Entrez)NC_000011 NC_018922 NT_167190 NW_004929380
Consensus coding sequences : CCDS (NCBI)MYRF
Cluster EST : UnigeneHs.473109 [ NCBI ]
CGAP (NCI)Hs.473109
Alternative Splicing GalleryENSG00000124920
Gene ExpressionMYRF [ NCBI-GEO ]   MYRF [ EBI - ARRAY_EXPRESS ]   MYRF [ SEEK ]   MYRF [ MEM ]
Gene Expression Viewer (FireBrowse)MYRF [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)745
GTEX Portal (Tissue expression)MYRF
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9Y2G1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9Y2G1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9Y2G1
Splice isoforms : SwissVarQ9Y2G1
Catalytic activity : Enzyme3.4.-.- [ Enzyme-Expasy ]   3.4.-.-3.4.-.- [ IntEnz-EBI ]   3.4.-.- [ BRENDA ]   3.4.-.- [ KEGG ]   
PhosPhoSitePlusQ9Y2G1
Domaine pattern : Prosite (Expaxy)ICA (PS51688)    NDT80 (PS51517)   
Domains : Interpro (EBI)MRF    MRF_C1    MRF_C2    NDT80_DNA-bd_dom    p53-like_TF_DNA-bd    S74_ICA   
Domain families : Pfam (Sanger)MRF_C1 (PF13887)    MRF_C2 (PF13888)    NDT80_PhoG (PF05224)   
Domain families : Pfam (NCBI)pfam13887    pfam13888    pfam05224   
Conserved Domain (NCBI)MYRF
DMDM Disease mutations745
Blocks (Seattle)MYRF
SuperfamilyQ9Y2G1
Human Protein AtlasENSG00000124920
Peptide AtlasQ9Y2G1
HPRD12213
IPIIPI00179851   IPI00180971   IPI00182485   IPI00871266   
Protein Interaction databases
DIP (DOE-UCLA)Q9Y2G1
IntAct (EBI)Q9Y2G1
FunCoupENSG00000124920
BioGRIDMYRF
STRING (EMBL)MYRF
ZODIACMYRF
Ontologies - Pathways
QuickGOQ9Y2G1
Ontology : AmiGODNA binding  sequence-specific DNA binding transcription factor activity  nucleus  endoplasmic reticulum membrane  transcription, DNA-templated  proteolysis  peptidase activity  oligodendrocyte development  integral component of membrane  central nervous system myelination  positive regulation of myelination  central nervous system myelin maintenance  positive regulation of transcription, DNA-templated  oligodendrocyte differentiation  
Ontology : EGO-EBIDNA binding  sequence-specific DNA binding transcription factor activity  nucleus  endoplasmic reticulum membrane  transcription, DNA-templated  proteolysis  peptidase activity  oligodendrocyte development  integral component of membrane  central nervous system myelination  positive regulation of myelination  central nervous system myelin maintenance  positive regulation of transcription, DNA-templated  oligodendrocyte differentiation  
NDEx NetworkMYRF
Atlas of Cancer Signalling NetworkMYRF
Wikipedia pathwaysMYRF
Orthology - Evolution
OrthoDB745
GeneTree (enSembl)ENSG00000124920
Phylogenetic Trees/Animal Genes : TreeFamMYRF
HOVERGENQ9Y2G1
HOGENOMQ9Y2G1
Homologs : HomoloGeneMYRF
Homology/Alignments : Family Browser (UCSC)MYRF
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMYRF [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MYRF
dbVarMYRF
ClinVarMYRF
1000_GenomesMYRF 
Exome Variant ServerMYRF
ExAC (Exome Aggregation Consortium)MYRF (select the gene name)
Genetic variants : HAPMAP745
Genomic Variants (DGV)MYRF [DGVbeta]
DECIPHER (Syndromes)11:61520109-61555990  ENSG00000124920
CONAN: Copy Number AnalysisMYRF 
Mutations
ICGC Data PortalMYRF 
TCGA Data PortalMYRF 
Broad Tumor PortalMYRF
OASIS PortalMYRF [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMYRF
BioMutasearch MYRF
DgiDB (Drug Gene Interaction Database)MYRF
DoCM (Curated mutations)MYRF (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MYRF (select a term)
intoGenMYRF
Cancer3DMYRF(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608329   
Orphanet
MedgenMYRF
Genetic Testing Registry MYRF
NextProtQ9Y2G1 [Medical]
TSGene745
GENETestsMYRF
Huge Navigator MYRF [HugePedia]
snp3D : Map Gene to Disease745
BioCentury BCIQMYRF
ClinGenMYRF
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD745
Chemical/Pharm GKB GenePA25500
Clinical trialMYRF
Miscellaneous
canSAR (ICR)MYRF (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMYRF
EVEXMYRF
GoPubMedMYRF
iHOPMYRF
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:34:21 CET 2017

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