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MYRFL (myelin regulatory factor like)

Identity

Alias (NCBI)C12orf15
C12orf28
bcm1377
HGNC (Hugo) MYRFL
HGNC Alias symbFLJ25056
bcm1377
HGNC Previous nameC12orf15
 C12orf28
HGNC Previous namechromosome 12 open reading frame 15
 chromosome 12 open reading frame 28
LocusID (NCBI) 196446
Atlas_Id 70640
Location 12q15  [Link to chromosome band 12q15]
Location_base_pair Starts at 69825227 and ends at 69959097 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
LAMA5 (20q13.33) / MYRFL (12q15)MYRFL (12q15) / MDM2 (12q15)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)MYRFL   26316
Cards
Entrez_Gene (NCBI)MYRFL    myelin regulatory factor like
AliasesC12orf15; C12orf28; bcm1377
GeneCards (Weizmann)MYRFL
Ensembl hg19 (Hinxton)ENSG00000166268 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000166268 [Gene_View]  ENSG00000166268 [Sequence]  chr12:69825227-69959097 [Contig_View]  MYRFL [Vega]
ICGC DataPortalENSG00000166268
TCGA cBioPortalMYRFL
AceView (NCBI)MYRFL
Genatlas (Paris)MYRFL
SOURCE (Princeton)MYRFL
Genetics Home Reference (NIH)MYRFL
Genomic and cartography
GoldenPath hg38 (UCSC)MYRFL  -     chr12:69825227-69959097 +  12q15   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MYRFL  -     12q15   [Description]    (hg19-Feb_2009)
GoldenPathMYRFL - 12q15 [CytoView hg19]  MYRFL - 12q15 [CytoView hg38]
ImmunoBaseENSG00000166268
Genome Data Viewer NCBIMYRFL [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK057785 BC101820 BC143553 BG187742 EG328354
RefSeq transcript (Entrez)NM_182530
Consensus coding sequences : CCDS (NCBI)MYRFL
Gene ExpressionMYRFL [ NCBI-GEO ]   MYRFL [ EBI - ARRAY_EXPRESS ]   MYRFL [ SEEK ]   MYRFL [ MEM ]
Gene Expression Viewer (FireBrowse)MYRFL [ Firebrowse - Broad ]
GenevisibleExpression of MYRFL in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)196446
GTEX Portal (Tissue expression)MYRFL
Human Protein AtlasENSG00000166268-MYRFL [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96LU7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96LU7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96LU7
PhosPhoSitePlusQ96LU7
Domaine pattern : Prosite (Expaxy)ICA (PS51688)    NDT80 (PS51517)   
Domains : Interpro (EBI)MYRF_C2    MYRF_ICA    NDT80_DNA-bd_dom    p53-like_TF_DNA-bd    S74_ICA   
Domain families : Pfam (Sanger)MRF_C1 (PF13887)    MRF_C2 (PF13888)    NDT80_PhoG (PF05224)    Peptidase_S74 (PF13884)   
Domain families : Pfam (NCBI)pfam13887    pfam13888    pfam05224    pfam13884   
Conserved Domain (NCBI)MYRFL
SuperfamilyQ96LU7
AlphaFold pdb e-kbQ96LU7   
Human Protein Atlas [tissue]ENSG00000166268-MYRFL [tissue]
HPRD08047
Protein Interaction databases
DIP (DOE-UCLA)Q96LU7
IntAct (EBI)Q96LU7
BioGRIDMYRFL
STRING (EMBL)MYRFL
ZODIACMYRFL
Ontologies - Pathways
QuickGOQ96LU7
Ontology : AmiGODNA-binding transcription factor activity  nucleus  endoplasmic reticulum membrane  integral component of membrane  protein autoprocessing  sequence-specific DNA binding  positive regulation of transcription, DNA-templated  
Ontology : EGO-EBIDNA-binding transcription factor activity  nucleus  endoplasmic reticulum membrane  integral component of membrane  protein autoprocessing  sequence-specific DNA binding  positive regulation of transcription, DNA-templated  
NDEx NetworkMYRFL
Atlas of Cancer Signalling NetworkMYRFL
Wikipedia pathwaysMYRFL
Orthology - Evolution
OrthoDB196446
GeneTree (enSembl)ENSG00000166268
Phylogenetic Trees/Animal Genes : TreeFamMYRFL
Homologs : HomoloGeneMYRFL
Homology/Alignments : Family Browser (UCSC)MYRFL
Gene fusions - Rearrangements
Fusion : QuiverMYRFL
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMYRFL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MYRFL
dbVarMYRFL
ClinVarMYRFL
MonarchMYRFL
1000_GenomesMYRFL 
Exome Variant ServerMYRFL
GNOMAD BrowserENSG00000166268
Varsome BrowserMYRFL
ACMGMYRFL variants
VarityQ96LU7
Genomic Variants (DGV)MYRFL [DGVbeta]
DECIPHERMYRFL [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMYRFL 
Mutations
ICGC Data PortalMYRFL 
TCGA Data PortalMYRFL 
Broad Tumor PortalMYRFL
OASIS PortalMYRFL [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMYRFL  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DMYRFL
Mutations and Diseases : HGMDMYRFL
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaMYRFL
DgiDB (Drug Gene Interaction Database)MYRFL
DoCM (Curated mutations)MYRFL
CIViC (Clinical Interpretations of Variants in Cancer)MYRFL
Cancer3DMYRFL
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETMYRFL
MedgenMYRFL
Genetic Testing Registry MYRFL
NextProtQ96LU7 [Medical]
GENETestsMYRFL
Target ValidationMYRFL
Huge Navigator MYRFL [HugePedia]
ClinGenMYRFL
Clinical trials, drugs, therapy
MyCancerGenomeMYRFL
Protein Interactions : CTDMYRFL
Pharm GKB GenePA142672299
PharosQ96LU7
Clinical trialMYRFL
Miscellaneous
canSAR (ICR)MYRFL
HarmonizomeMYRFL
DataMed IndexMYRFL
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXMYRFL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 16:12:14 CEST 2021

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