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MYRFL (myelin regulatory factor-like)

Identity

Alias_namesC12orf15
C12orf28
chromosome 12 open reading frame 15
chromosome 12 open reading frame 28
Alias_symbol (synonym)FLJ25056
bcm1377
Other alias
HGNC (Hugo) MYRFL
LocusID (NCBI) 196446
Atlas_Id 70640
Location 12q15  [Link to chromosome band 12q15]
Location_base_pair Starts at 69825323 and ends at 69958725 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
LAMA5 (20q13.33) / MYRFL (12q15)MYRFL (12q15) / MDM2 (12q15)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MYRFL   26316
Cards
Entrez_Gene (NCBI)MYRFL  196446  myelin regulatory factor-like
AliasesC12orf15; C12orf28; bcm1377
GeneCards (Weizmann)MYRFL
Ensembl hg19 (Hinxton)ENSG00000166268 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000166268 [Gene_View]  chr12:69825323-69958725 [Contig_View]  MYRFL [Vega]
ICGC DataPortalENSG00000166268
TCGA cBioPortalMYRFL
AceView (NCBI)MYRFL
Genatlas (Paris)MYRFL
WikiGenes196446
SOURCE (Princeton)MYRFL
Genetics Home Reference (NIH)MYRFL
Genomic and cartography
GoldenPath hg38 (UCSC)MYRFL  -     chr12:69825323-69958725 +  12q15   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MYRFL  -     12q15   [Description]    (hg19-Feb_2009)
EnsemblMYRFL - 12q15 [CytoView hg19]  MYRFL - 12q15 [CytoView hg38]
Mapping of homologs : NCBIMYRFL [Mapview hg19]  MYRFL [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK057785 BC101820 BC143553 BG187742 EG328354
RefSeq transcript (Entrez)NM_182530
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MYRFL
Cluster EST : UnigeneHs.740075 [ NCBI ]
CGAP (NCI)Hs.740075
Alternative Splicing GalleryENSG00000166268
Gene ExpressionMYRFL [ NCBI-GEO ]   MYRFL [ EBI - ARRAY_EXPRESS ]   MYRFL [ SEEK ]   MYRFL [ MEM ]
Gene Expression Viewer (FireBrowse)MYRFL [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)196446
GTEX Portal (Tissue expression)MYRFL
Human Protein AtlasENSG00000166268-MYRFL [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96LU7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96LU7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96LU7
Splice isoforms : SwissVarQ96LU7
PhosPhoSitePlusQ96LU7
Domaine pattern : Prosite (Expaxy)ICA (PS51688)    NDT80 (PS51517)   
Domains : Interpro (EBI)MRF_C1    MRF_C2    NDT80_DNA-bd_dom    p53-like_TF_DNA-bd    S74_ICA   
Domain families : Pfam (Sanger)MRF_C1 (PF13887)    MRF_C2 (PF13888)    NDT80_PhoG (PF05224)    Peptidase_S74 (PF13884)   
Domain families : Pfam (NCBI)pfam13887    pfam13888    pfam05224    pfam13884   
Conserved Domain (NCBI)MYRFL
DMDM Disease mutations196446
Blocks (Seattle)MYRFL
SuperfamilyQ96LU7
Human Protein Atlas [tissue]ENSG00000166268-MYRFL [tissue]
Peptide AtlasQ96LU7
HPRD08047
IPIIPI00888646   IPI00922179   IPI01020857   IPI00307425   IPI01021140   
Protein Interaction databases
DIP (DOE-UCLA)Q96LU7
IntAct (EBI)Q96LU7
FunCoupENSG00000166268
BioGRIDMYRFL
STRING (EMBL)MYRFL
ZODIACMYRFL
Ontologies - Pathways
QuickGOQ96LU7
Ontology : AmiGODNA binding  transcription factor activity, sequence-specific DNA binding  regulation of transcription, DNA-templated  integral component of membrane  
Ontology : EGO-EBIDNA binding  transcription factor activity, sequence-specific DNA binding  regulation of transcription, DNA-templated  integral component of membrane  
NDEx NetworkMYRFL
Atlas of Cancer Signalling NetworkMYRFL
Wikipedia pathwaysMYRFL
Orthology - Evolution
OrthoDB196446
GeneTree (enSembl)ENSG00000166268
Phylogenetic Trees/Animal Genes : TreeFamMYRFL
HOVERGENQ96LU7
HOGENOMQ96LU7
Homologs : HomoloGeneMYRFL
Homology/Alignments : Family Browser (UCSC)MYRFL
Gene fusions - Rearrangements
Tumor Fusion PortalMYRFL
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMYRFL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MYRFL
dbVarMYRFL
ClinVarMYRFL
1000_GenomesMYRFL 
Exome Variant ServerMYRFL
ExAC (Exome Aggregation Consortium)ENSG00000166268
GNOMAD BrowserENSG00000166268
Genetic variants : HAPMAP196446
Genomic Variants (DGV)MYRFL [DGVbeta]
DECIPHERMYRFL [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMYRFL 
Mutations
ICGC Data PortalMYRFL 
TCGA Data PortalMYRFL 
Broad Tumor PortalMYRFL
OASIS PortalMYRFL [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMYRFL
BioMutasearch MYRFL
DgiDB (Drug Gene Interaction Database)MYRFL
DoCM (Curated mutations)MYRFL (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MYRFL (select a term)
intoGenMYRFL
Cancer3DMYRFL(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETMYRFL
MedgenMYRFL
Genetic Testing Registry MYRFL
NextProtQ96LU7 [Medical]
TSGene196446
GENETestsMYRFL
Target ValidationMYRFL
Huge Navigator MYRFL [HugePedia]
snp3D : Map Gene to Disease196446
BioCentury BCIQMYRFL
ClinGenMYRFL
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD196446
Chemical/Pharm GKB GenePA142672299
Clinical trialMYRFL
Miscellaneous
canSAR (ICR)MYRFL (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMYRFL
EVEXMYRFL
GoPubMedMYRFL
iHOPMYRFL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Nov 21 13:27:01 CET 2017

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