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MYZAP (myocardial zonula adherens protein)

Identity

Alias_symbol (synonym)MYOZAP
Gup
Gup1
GCOM1
Other alias
HGNC (Hugo) MYZAP
LocusID (NCBI) 100820829
Atlas_Id 70644
Location 15q21.3  [Link to chromosome band 15q21]
Location_base_pair Starts at 57591904 and ends at 57685364 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
MYZAP (15q21.3) / CFAP45 (1q23.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MYZAP   43444
Cards
Entrez_Gene (NCBI)MYZAP  100820829  myocardial zonula adherens protein
AliasesGCOM1; Gup; MYOZAP
GeneCards (Weizmann)MYZAP
Ensembl hg19 (Hinxton)ENSG00000263155 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000263155 [Gene_View]  chr15:57591904-57685364 [Contig_View]  MYZAP [Vega]
ICGC DataPortalENSG00000263155
TCGA cBioPortalMYZAP
AceView (NCBI)MYZAP
Genatlas (Paris)MYZAP
WikiGenes100820829
SOURCE (Princeton)MYZAP
Genetics Home Reference (NIH)MYZAP
Genomic and cartography
GoldenPath hg38 (UCSC)MYZAP  -     chr15:57591904-57685364 +  15q21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MYZAP  -     15q21.3   [Description]    (hg19-Feb_2009)
EnsemblMYZAP - 15q21.3 [CytoView hg19]  MYZAP - 15q21.3 [CytoView hg38]
Mapping of homologs : NCBIMYZAP [Mapview hg19]  MYZAP [Mapview hg38]
OMIM614071   
Gene and transcription
Genbank (Entrez)AK055535 AL833028 AL833142 AY207459 AY237639
RefSeq transcript (Entrez)NM_001018100 NM_152451
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MYZAP
Cluster EST : UnigeneHs.437256 [ NCBI ]
CGAP (NCI)Hs.437256
Alternative Splicing GalleryENSG00000263155
Gene ExpressionMYZAP [ NCBI-GEO ]   MYZAP [ EBI - ARRAY_EXPRESS ]   MYZAP [ SEEK ]   MYZAP [ MEM ]
Gene Expression Viewer (FireBrowse)MYZAP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100820829
GTEX Portal (Tissue expression)MYZAP
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0CAP1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0CAP1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0CAP1
Splice isoforms : SwissVarP0CAP1
PhosPhoSitePlusP0CAP1
Domains : Interpro (EBI)Myozap   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MYZAP
DMDM Disease mutations100820829
Blocks (Seattle)MYZAP
PDB (SRS)2KXS   
PDB (PDBSum)2KXS   
PDB (IMB)2KXS   
PDB (RSDB)2KXS   
Structural Biology KnowledgeBase2KXS   
SCOP (Structural Classification of Proteins)2KXS   
CATH (Classification of proteins structures)2KXS   
SuperfamilyP0CAP1
Human Protein AtlasENSG00000263155
Peptide AtlasP0CAP1
Protein Interaction databases
DIP (DOE-UCLA)P0CAP1
IntAct (EBI)P0CAP1
FunCoupENSG00000263155
BioGRIDMYZAP
STRING (EMBL)MYZAP
ZODIACMYZAP
Ontologies - Pathways
QuickGOP0CAP1
Ontology : AmiGOprotein binding  Z disc  cell junction  cortical actin cytoskeleton  cortical actin cytoskeleton  extrinsic component of cytoplasmic side of plasma membrane  I band  I band  intracellular signal transduction  
Ontology : EGO-EBIprotein binding  Z disc  cell junction  cortical actin cytoskeleton  cortical actin cytoskeleton  extrinsic component of cytoplasmic side of plasma membrane  I band  I band  intracellular signal transduction  
NDEx NetworkMYZAP
Atlas of Cancer Signalling NetworkMYZAP
Wikipedia pathwaysMYZAP
Orthology - Evolution
OrthoDB100820829
GeneTree (enSembl)ENSG00000263155
Phylogenetic Trees/Animal Genes : TreeFamMYZAP
HOVERGENP0CAP1
HOGENOMP0CAP1
Homologs : HomoloGeneMYZAP
Homology/Alignments : Family Browser (UCSC)MYZAP
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMYZAP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MYZAP
dbVarMYZAP
ClinVarMYZAP
1000_GenomesMYZAP 
Exome Variant ServerMYZAP
ExAC (Exome Aggregation Consortium)MYZAP (select the gene name)
Genetic variants : HAPMAP100820829
Genomic Variants (DGV)MYZAP [DGVbeta]
DECIPHERMYZAP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMYZAP 
Mutations
ICGC Data PortalMYZAP 
TCGA Data PortalMYZAP 
Broad Tumor PortalMYZAP
OASIS PortalMYZAP [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMYZAP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MYZAP
DgiDB (Drug Gene Interaction Database)MYZAP
DoCM (Curated mutations)MYZAP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MYZAP (select a term)
intoGenMYZAP
Cancer3DMYZAP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614071   
Orphanet
MedgenMYZAP
Genetic Testing Registry MYZAP
NextProtP0CAP1 [Medical]
TSGene100820829
GENETestsMYZAP
Target ValidationMYZAP
Huge Navigator MYZAP [HugePedia]
snp3D : Map Gene to Disease100820829
BioCentury BCIQMYZAP
ClinGenMYZAP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100820829
Chemical/Pharm GKB GenePA166049098
Clinical trialMYZAP
Miscellaneous
canSAR (ICR)MYZAP (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMYZAP
EVEXMYZAP
GoPubMedMYZAP
iHOPMYZAP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:32:07 CEST 2017

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