Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MZT1 (mitotic spindle organizing protein 1)

Identity

Alias_namesC13orf37
chromosome 13 open reading frame 37
Alias_symbol (synonym)LOC440145
FLJ21869
MGC150539
RP11-11C5.2
MOZART1
Other alias
HGNC (Hugo) MZT1
LocusID (NCBI) 440145
Atlas_Id 70646
Location 13q21.33  [Link to chromosome band 13q21]
Location_base_pair Starts at 72708357 and ends at 72727800 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MZT1   33830
Cards
Entrez_Gene (NCBI)MZT1  440145  mitotic spindle organizing protein 1
AliasesC13orf37; MOZART1
GeneCards (Weizmann)MZT1
Ensembl hg19 (Hinxton)ENSG00000204899 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204899 [Gene_View]  chr13:72708357-72727800 [Contig_View]  MZT1 [Vega]
ICGC DataPortalENSG00000204899
TCGA cBioPortalMZT1
AceView (NCBI)MZT1
Genatlas (Paris)MZT1
WikiGenes440145
SOURCE (Princeton)MZT1
Genetics Home Reference (NIH)MZT1
Genomic and cartography
GoldenPath hg38 (UCSC)MZT1  -     chr13:72708357-72727800 -  13q21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MZT1  -     13q21.33   [Description]    (hg19-Feb_2009)
EnsemblMZT1 - 13q21.33 [CytoView hg19]  MZT1 - 13q21.33 [CytoView hg38]
Mapping of homologs : NCBIMZT1 [Mapview hg19]  MZT1 [Mapview hg38]
OMIM613448   
Gene and transcription
Genbank (Entrez)AK025522 BC013405 BC047655 BC062361 BC080523
RefSeq transcript (Entrez)NM_001071775
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MZT1
Cluster EST : UnigeneHs.28465 [ NCBI ]
CGAP (NCI)Hs.28465
Alternative Splicing GalleryENSG00000204899
Gene ExpressionMZT1 [ NCBI-GEO ]   MZT1 [ EBI - ARRAY_EXPRESS ]   MZT1 [ SEEK ]   MZT1 [ MEM ]
Gene Expression Viewer (FireBrowse)MZT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)440145
GTEX Portal (Tissue expression)MZT1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ08AG7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ08AG7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ08AG7
Splice isoforms : SwissVarQ08AG7
PhosPhoSitePlusQ08AG7
Domains : Interpro (EBI)MZT1   
Domain families : Pfam (Sanger)MOZART1 (PF12554)   
Domain families : Pfam (NCBI)pfam12554   
Conserved Domain (NCBI)MZT1
DMDM Disease mutations440145
Blocks (Seattle)MZT1
SuperfamilyQ08AG7
Human Protein AtlasENSG00000204899
Peptide AtlasQ08AG7
IPIIPI00456981   
Protein Interaction databases
DIP (DOE-UCLA)Q08AG7
IntAct (EBI)Q08AG7
FunCoupENSG00000204899
BioGRIDMZT1
STRING (EMBL)MZT1
ZODIACMZT1
Ontologies - Pathways
QuickGOQ08AG7
Ontology : AmiGOequatorial microtubule organizing center  protein binding  centrosome  spindle  gamma-tubulin ring complex  interphase microtubule organizing center  gamma-tubulin complex localization  gamma-tubulin binding  interphase microtubule nucleation by interphase microtubule organizing center  microtubule nucleation by spindle pole body  gamma-tubulin small complex, mitotic spindle pole body  mitotic spindle assembly  
Ontology : EGO-EBIequatorial microtubule organizing center  protein binding  centrosome  spindle  gamma-tubulin ring complex  interphase microtubule organizing center  gamma-tubulin complex localization  gamma-tubulin binding  interphase microtubule nucleation by interphase microtubule organizing center  microtubule nucleation by spindle pole body  gamma-tubulin small complex, mitotic spindle pole body  mitotic spindle assembly  
NDEx NetworkMZT1
Atlas of Cancer Signalling NetworkMZT1
Wikipedia pathwaysMZT1
Orthology - Evolution
OrthoDB440145
GeneTree (enSembl)ENSG00000204899
Phylogenetic Trees/Animal Genes : TreeFamMZT1
HOVERGENQ08AG7
HOGENOMQ08AG7
Homologs : HomoloGeneMZT1
Homology/Alignments : Family Browser (UCSC)MZT1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerMZT1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)MZT1
dbVarMZT1
ClinVarMZT1
1000_GenomesMZT1 
Exome Variant ServerMZT1
ExAC (Exome Aggregation Consortium)MZT1 (select the gene name)
Genetic variants : HAPMAP440145
Genomic Variants (DGV)MZT1 [DGVbeta]
DECIPHERMZT1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisMZT1 
Mutations
ICGC Data PortalMZT1 
TCGA Data PortalMZT1 
Broad Tumor PortalMZT1
OASIS PortalMZT1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICMZT1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDMZT1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch MZT1
DgiDB (Drug Gene Interaction Database)MZT1
DoCM (Curated mutations)MZT1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)MZT1 (select a term)
intoGenMZT1
Cancer3DMZT1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613448   
Orphanet
MedgenMZT1
Genetic Testing Registry MZT1
NextProtQ08AG7 [Medical]
TSGene440145
GENETestsMZT1
Target ValidationMZT1
Huge Navigator MZT1 [HugePedia]
snp3D : Map Gene to Disease440145
BioCentury BCIQMZT1
ClinGenMZT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD440145
Chemical/Pharm GKB GenePA165505227
Clinical trialMZT1
Miscellaneous
canSAR (ICR)MZT1 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMZT1
EVEXMZT1
GoPubMedMZT1
iHOPMZT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:32:08 CEST 2017

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