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NAA15 (N-alpha-acetyltransferase 15, NatA auxiliary subunit)

Identity

Alias (NCBI)Ga19
MRD50
NARG1
NAT1P
NATH
TBDN
TBDN100
HGNC (Hugo) NAA15
HGNC Alias symbTBDN100
NATH
FLJ13340
HGNC Previous nameNARG1
HGNC Previous nameNMDA receptor regulated 1
 N(alpha)-acetyltransferase 15, NatA auxiliary subunit
LocusID (NCBI) 80155
Atlas_Id 51332
Location 4q31.1  [Link to chromosome band 4q31]
Location_base_pair Starts at 139301505 and ends at 139391384 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
NAA15 (4q31.1) / C4orf32 (4q25)NAA15 (4q31.1) / LPAR1 (9q31.3)NAA15 (4q31.1) / SLC10A7 (4q31.22)
NAA15 (4q31.1) / STPG2 (4q22.3)PALLD (4q32.3) / NAA15 (4q31.1)RPL23A (17q11.2) / NAA15 (4q31.1)
NAA15 4q31.1 C4orf37NAA15 4q31.1 / LPAR1 9q31.3NAA15 4q31.1 / SLC10A7 4q31.22
PALLD 4q32.3 / NAA15 4q31.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)NAA15   30782
Cards
Entrez_Gene (NCBI)NAA15    N-alpha-acetyltransferase 15, NatA auxiliary subunit
AliasesGa19; MRD50; NARG1; NAT1P; 
NATH; TBDN; TBDN100
GeneCards (Weizmann)NAA15
Ensembl hg19 (Hinxton)ENSG00000164134 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000164134 [Gene_View]  ENSG00000164134 [Sequence]  chr4:139301505-139391384 [Contig_View]  NAA15 [Vega]
ICGC DataPortalENSG00000164134
TCGA cBioPortalNAA15
AceView (NCBI)NAA15
Genatlas (Paris)NAA15
SOURCE (Princeton)NAA15
Genetics Home Reference (NIH)NAA15
Genomic and cartography
GoldenPath hg38 (UCSC)NAA15  -     chr4:139301505-139391384 +  4q31.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NAA15  -     4q31.1   [Description]    (hg19-Feb_2009)
GoldenPathNAA15 - 4q31.1 [CytoView hg19]  NAA15 - 4q31.1 [CytoView hg38]
ImmunoBaseENSG00000164134
Genome Data Viewer NCBINAA15 [Mapview hg19]  
OMIM608000   617787   
Gene and transcription
Genbank (Entrez)AF327722 AJ314788 AK001595 AK023387 AK023402
RefSeq transcript (Entrez)NM_057175
Consensus coding sequences : CCDS (NCBI)NAA15
Gene ExpressionNAA15 [ NCBI-GEO ]   NAA15 [ EBI - ARRAY_EXPRESS ]   NAA15 [ SEEK ]   NAA15 [ MEM ]
Gene Expression Viewer (FireBrowse)NAA15 [ Firebrowse - Broad ]
GenevisibleExpression of NAA15 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80155
GTEX Portal (Tissue expression)NAA15
Human Protein AtlasENSG00000164134-NAA15 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BXJ9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BXJ9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BXJ9
PhosPhoSitePlusQ9BXJ9
Domaine pattern : Prosite (Expaxy)TPR (PS50005)    TPR_REGION (PS50293)   
Domains : Interpro (EBI)NatA_aux_su    TPR-contain_dom    TPR-like_helical_dom_sf    TPR_repeat   
Domain families : Pfam (Sanger)NARP1 (PF12569)    TPR_8 (PF13181)   
Domain families : Pfam (NCBI)pfam12569    pfam13181   
Domain families : Smart (EMBL)TPR (SM00028)  
Conserved Domain (NCBI)NAA15
PDB (RSDB)6C95    6C9M    6PPL    6PW9   
PDB Europe6C95    6C9M    6PPL    6PW9   
PDB (PDBSum)6C95    6C9M    6PPL    6PW9   
PDB (IMB)6C95    6C9M    6PPL    6PW9   
Structural Biology KnowledgeBase6C95    6C9M    6PPL    6PW9   
SCOP (Structural Classification of Proteins)6C95    6C9M    6PPL    6PW9   
CATH (Classification of proteins structures)6C95    6C9M    6PPL    6PW9   
SuperfamilyQ9BXJ9
AlphaFold pdb e-kbQ9BXJ9   
Human Protein Atlas [tissue]ENSG00000164134-NAA15 [tissue]
HPRD10471
Protein Interaction databases
DIP (DOE-UCLA)Q9BXJ9
IntAct (EBI)Q9BXJ9
BioGRIDNAA15
STRING (EMBL)NAA15
ZODIACNAA15
Ontologies - Pathways
QuickGOQ9BXJ9
Ontology : AmiGOangiogenesis  RNA binding  peptide alpha-N-acetyltransferase activity  protein binding  nucleus  transcription regulator complex  cytoplasm  cytoplasm  cytosol  N-terminal protein amino acid acetylation  membrane  acetyltransferase activity  nuclear body  N-terminal peptidyl-methionine acetylation  cell differentiation  NatA complex  NatA complex  ribosome binding  ribosome binding  negative regulation of apoptotic process  intracellular membrane-bounded organelle  positive regulation of transcription, DNA-templated  protein stabilization  
Ontology : EGO-EBIangiogenesis  RNA binding  peptide alpha-N-acetyltransferase activity  protein binding  nucleus  transcription regulator complex  cytoplasm  cytoplasm  cytosol  N-terminal protein amino acid acetylation  membrane  acetyltransferase activity  nuclear body  N-terminal peptidyl-methionine acetylation  cell differentiation  NatA complex  NatA complex  ribosome binding  ribosome binding  negative regulation of apoptotic process  intracellular membrane-bounded organelle  positive regulation of transcription, DNA-templated  protein stabilization  
NDEx NetworkNAA15
Atlas of Cancer Signalling NetworkNAA15
Wikipedia pathwaysNAA15
Orthology - Evolution
OrthoDB80155
GeneTree (enSembl)ENSG00000164134
Phylogenetic Trees/Animal Genes : TreeFamNAA15
Homologs : HomoloGeneNAA15
Homology/Alignments : Family Browser (UCSC)NAA15
Gene fusions - Rearrangements
Fusion : MitelmanNAA15/LPAR1 [4q31.1/9q31.3]  
Fusion : MitelmanNAA15/SLC10A7 [4q31.1/4q31.22]  
Fusion : MitelmanNAA15/STPG2 [4q31.1/4q22.3]  
Fusion : MitelmanPALLD/NAA15 [4q32.3/4q31.1]  
Fusion : QuiverNAA15
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNAA15 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NAA15
dbVarNAA15
ClinVarNAA15
MonarchNAA15
1000_GenomesNAA15 
Exome Variant ServerNAA15
GNOMAD BrowserENSG00000164134
Varsome BrowserNAA15
ACMGNAA15 variants
VarityQ9BXJ9
Genomic Variants (DGV)NAA15 [DGVbeta]
DECIPHERNAA15 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNAA15 
Mutations
ICGC Data PortalNAA15 
TCGA Data PortalNAA15 
Broad Tumor PortalNAA15
OASIS PortalNAA15 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNAA15  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DNAA15
Mutations and Diseases : HGMDNAA15
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaNAA15
DgiDB (Drug Gene Interaction Database)NAA15
DoCM (Curated mutations)NAA15
CIViC (Clinical Interpretations of Variants in Cancer)NAA15
Cancer3DNAA15
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608000    617787   
Orphanet
DisGeNETNAA15
MedgenNAA15
Genetic Testing Registry NAA15
NextProtQ9BXJ9 [Medical]
GENETestsNAA15
Target ValidationNAA15
Huge Navigator NAA15 [HugePedia]
ClinGenNAA15
Clinical trials, drugs, therapy
MyCancerGenomeNAA15
Protein Interactions : CTDNAA15
Pharm GKB GenePA165664293
PharosQ9BXJ9
Clinical trialNAA15
Miscellaneous
canSAR (ICR)NAA15
HarmonizomeNAA15
DataMed IndexNAA15
Probes
Litterature
PubMed68 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXNAA15
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:21:56 CEST 2021

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