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NAA20 (N(alpha)-acetyltransferase 20, NatB catalytic subunit)

Identity

Alias_namesNAT5
N-acetyltransferase 5, ARD1 subunit (arrest-defective 1, S. cerevisiae, homolog)
N-acetyltransferase 5 (ARD1 homolog, S. cerevisiae)
N-acetyltransferase 5
N-acetyltransferase 5 (GCN5-related, putative)
Alias_symbol (synonym)dJ1002M8.1
NAT3
Other aliasNAT3P
NAT5P
HGNC (Hugo) NAA20
LocusID (NCBI) 51126
Atlas_Id 51465
Location 20p11.23  [Link to chromosome band 20p11]
Location_base_pair Starts at 20017290 and ends at 20033629 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
NAA20 (20p11.23) / JUP (17q21.2)NAA20 (20p11.23) / NAA20 (20p11.23)NAA20 (20p11.23) / SCD (10q24.31)
NAA20 (20p11.23) / TBC1D32 (6q22.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NAA20   15908
Cards
Entrez_Gene (NCBI)NAA20  51126  N(alpha)-acetyltransferase 20, NatB catalytic subunit
AliasesNAT3; NAT3P; NAT5; NAT5P; 
dJ1002M8.1
GeneCards (Weizmann)NAA20
Ensembl hg19 (Hinxton)ENSG00000173418 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000173418 [Gene_View]  chr20:20017290-20033629 [Contig_View]  NAA20 [Vega]
ICGC DataPortalENSG00000173418
TCGA cBioPortalNAA20
AceView (NCBI)NAA20
Genatlas (Paris)NAA20
WikiGenes51126
SOURCE (Princeton)NAA20
Genetics Home Reference (NIH)NAA20
Genomic and cartography
GoldenPath hg38 (UCSC)NAA20  -     chr20:20017290-20033629 +  20p11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NAA20  -     20p11.23   [Description]    (hg19-Feb_2009)
EnsemblNAA20 - 20p11.23 [CytoView hg19]  NAA20 - 20p11.23 [CytoView hg38]
Mapping of homologs : NCBINAA20 [Mapview hg19]  NAA20 [Mapview hg38]
OMIM610833   
Gene and transcription
Genbank (Entrez)AF085355 AK311819 AL136641 AM393470 AM393560
RefSeq transcript (Entrez)NM_016100 NM_181527 NM_181528
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NAA20
Cluster EST : UnigeneHs.708298 [ NCBI ]
CGAP (NCI)Hs.708298
Alternative Splicing GalleryENSG00000173418
Gene ExpressionNAA20 [ NCBI-GEO ]   NAA20 [ EBI - ARRAY_EXPRESS ]   NAA20 [ SEEK ]   NAA20 [ MEM ]
Gene Expression Viewer (FireBrowse)NAA20 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51126
GTEX Portal (Tissue expression)NAA20
Protein : pattern, domain, 3D structure
UniProt/SwissProtP61599   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP61599  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP61599
Splice isoforms : SwissVarP61599
PhosPhoSitePlusP61599
Domaine pattern : Prosite (Expaxy)GNAT (PS51186)   
Domains : Interpro (EBI)Acyl_CoA_acyltransferase    GNAT_dom   
Domain families : Pfam (Sanger)Acetyltransf_1 (PF00583)   
Domain families : Pfam (NCBI)pfam00583   
Conserved Domain (NCBI)NAA20
DMDM Disease mutations51126
Blocks (Seattle)NAA20
SuperfamilyP61599
Human Protein AtlasENSG00000173418
Peptide AtlasP61599
HPRD07136
IPIIPI00007174   IPI00375482   IPI00375483   
Protein Interaction databases
DIP (DOE-UCLA)P61599
IntAct (EBI)P61599
FunCoupENSG00000173418
BioGRIDNAA20
STRING (EMBL)NAA20
ZODIACNAA20
Ontologies - Pathways
QuickGOP61599
Ontology : AmiGOpeptide alpha-N-acetyltransferase activity  intracellular  nucleus  cytoplasm  cytosol  N-terminal peptidyl-methionine acetylation  NatB complex  
Ontology : EGO-EBIpeptide alpha-N-acetyltransferase activity  intracellular  nucleus  cytoplasm  cytosol  N-terminal peptidyl-methionine acetylation  NatB complex  
NDEx NetworkNAA20
Atlas of Cancer Signalling NetworkNAA20
Wikipedia pathwaysNAA20
Orthology - Evolution
OrthoDB51126
GeneTree (enSembl)ENSG00000173418
Phylogenetic Trees/Animal Genes : TreeFamNAA20
HOVERGENP61599
HOGENOMP61599
Homologs : HomoloGeneNAA20
Homology/Alignments : Family Browser (UCSC)NAA20
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNAA20 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NAA20
dbVarNAA20
ClinVarNAA20
1000_GenomesNAA20 
Exome Variant ServerNAA20
ExAC (Exome Aggregation Consortium)NAA20 (select the gene name)
Genetic variants : HAPMAP51126
Genomic Variants (DGV)NAA20 [DGVbeta]
DECIPHERNAA20 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNAA20 
Mutations
ICGC Data PortalNAA20 
TCGA Data PortalNAA20 
Broad Tumor PortalNAA20
OASIS PortalNAA20 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNAA20  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNAA20
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NAA20
DgiDB (Drug Gene Interaction Database)NAA20
DoCM (Curated mutations)NAA20 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NAA20 (select a term)
intoGenNAA20
Cancer3DNAA20(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610833   
Orphanet
MedgenNAA20
Genetic Testing Registry NAA20
NextProtP61599 [Medical]
TSGene51126
GENETestsNAA20
Target ValidationNAA20
Huge Navigator NAA20 [HugePedia]
snp3D : Map Gene to Disease51126
BioCentury BCIQNAA20
ClinGenNAA20
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51126
Chemical/Pharm GKB GenePA31449
Clinical trialNAA20
Miscellaneous
canSAR (ICR)NAA20 (select the gene name)
Probes
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNAA20
EVEXNAA20
GoPubMedNAA20
iHOPNAA20
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:21:16 CEST 2017

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