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NAA25 (N(alpha)-acetyltransferase 25, NatB auxiliary subunit)

Identity

Alias_namesC12orf30
chromosome 12 open reading frame 30
Alias_symbol (synonym)FLJ13089
Other aliasMDM20
NAP1
HGNC (Hugo) NAA25
LocusID (NCBI) 80018
Atlas_Id 70657
Location 12q24.13  [Link to chromosome band 12q24]
Location_base_pair Starts at 112464493 and ends at 112546635 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
NAA25 (12q24.13) / FMR1 (Xq27.3)NAA25 (12q24.13) / SLC25A21 (14q13.3)NAA25 (12q24.13) / TBX5 (12q24.21)
SLC25A26 (3p14.1) / NAA25 (12q24.13)NAA25 TBX5NAA25 SLC25A21

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NAA25   25783
Cards
Entrez_Gene (NCBI)NAA25  80018  N(alpha)-acetyltransferase 25, NatB auxiliary subunit
AliasesC12orf30; MDM20; NAP1
GeneCards (Weizmann)NAA25
Ensembl hg19 (Hinxton)ENSG00000111300 [Gene_View]  chr12:112464493-112546635 [Contig_View]  NAA25 [Vega]
Ensembl hg38 (Hinxton)ENSG00000111300 [Gene_View]  chr12:112464493-112546635 [Contig_View]  NAA25 [Vega]
ICGC DataPortalENSG00000111300
TCGA cBioPortalNAA25
AceView (NCBI)NAA25
Genatlas (Paris)NAA25
WikiGenes80018
SOURCE (Princeton)NAA25
Genetics Home Reference (NIH)NAA25
Genomic and cartography
GoldenPath hg19 (UCSC)NAA25  -     chr12:112464493-112546635 -  12q24.13   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)NAA25  -     12q24.13   [Description]    (hg38-Dec_2013)
EnsemblNAA25 - 12q24.13 [CytoView hg19]  NAA25 - 12q24.13 [CytoView hg38]
Mapping of homologs : NCBINAA25 [Mapview hg19]  NAA25 [Mapview hg38]
OMIM612755   
Gene and transcription
Genbank (Entrez)AA653507 AB054990 AK023151 AK292485 AK307494
RefSeq transcript (Entrez)NM_024953
RefSeq genomic (Entrez)NC_000012 NC_018923 NG_017071 NT_029419 NW_004929385
Consensus coding sequences : CCDS (NCBI)NAA25
Cluster EST : UnigeneHs.530941 [ NCBI ]
CGAP (NCI)Hs.530941
Alternative Splicing GalleryENSG00000111300
Gene ExpressionNAA25 [ NCBI-GEO ]   NAA25 [ EBI - ARRAY_EXPRESS ]   NAA25 [ SEEK ]   NAA25 [ MEM ]
Gene Expression Viewer (FireBrowse)NAA25 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80018
GTEX Portal (Tissue expression)NAA25
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ14CX7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ14CX7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ14CX7
Splice isoforms : SwissVarQ14CX7
PhosPhoSitePlusQ14CX7
Domaine pattern : Prosite (Expaxy)TPR_REGION (PS50293)   
Domains : Interpro (EBI)N-acetylTrfase_B_cplx_non-cat    TPR-contain_dom    TPR-like_helical_dom   
Domain families : Pfam (Sanger)NatB_MDM20 (PF09797)   
Domain families : Pfam (NCBI)pfam09797   
Conserved Domain (NCBI)NAA25
DMDM Disease mutations80018
Blocks (Seattle)NAA25
SuperfamilyQ14CX7
Human Protein AtlasENSG00000111300
Peptide AtlasQ14CX7
HPRD08578
IPIIPI00025890   IPI00852843   IPI01021012   IPI01020859   IPI01021847   IPI01021635   
Protein Interaction databases
DIP (DOE-UCLA)Q14CX7
IntAct (EBI)Q14CX7
FunCoupENSG00000111300
BioGRIDNAA25
STRING (EMBL)NAA25
ZODIACNAA25
Ontologies - Pathways
QuickGOQ14CX7
Ontology : AmiGOnucleoplasm  cytoplasm  Golgi apparatus  
Ontology : EGO-EBInucleoplasm  cytoplasm  Golgi apparatus  
NDEx NetworkNAA25
Atlas of Cancer Signalling NetworkNAA25
Wikipedia pathwaysNAA25
Orthology - Evolution
OrthoDB80018
GeneTree (enSembl)ENSG00000111300
Phylogenetic Trees/Animal Genes : TreeFamNAA25
HOVERGENQ14CX7
HOGENOMQ14CX7
Homologs : HomoloGeneNAA25
Homology/Alignments : Family Browser (UCSC)NAA25
Gene fusions - Rearrangements
Fusion: TCGANAA25 TBX5
Fusion: TCGANAA25 SLC25A21
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNAA25 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NAA25
dbVarNAA25
ClinVarNAA25
1000_GenomesNAA25 
Exome Variant ServerNAA25
ExAC (Exome Aggregation Consortium)NAA25 (select the gene name)
Genetic variants : HAPMAP80018
Genomic Variants (DGV)NAA25 [DGVbeta]
DECIPHER (Syndromes)12:112464493-112546635  ENSG00000111300
CONAN: Copy Number AnalysisNAA25 
Mutations
ICGC Data PortalNAA25 
TCGA Data PortalNAA25 
Broad Tumor PortalNAA25
OASIS PortalNAA25 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNAA25  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNAA25
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NAA25
DgiDB (Drug Gene Interaction Database)NAA25
DoCM (Curated mutations)NAA25 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NAA25 (select a term)
intoGenNAA25
Cancer3DNAA25(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612755   
Orphanet
MedgenNAA25
Genetic Testing Registry NAA25
NextProtQ14CX7 [Medical]
TSGene80018
GENETestsNAA25
Huge Navigator NAA25 [HugePedia]
snp3D : Map Gene to Disease80018
BioCentury BCIQNAA25
ClinGenNAA25
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80018
Chemical/Pharm GKB GenePA165513030
Clinical trialNAA25
Miscellaneous
canSAR (ICR)NAA25 (select the gene name)
Probes
Litterature
PubMed26 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNAA25
EVEXNAA25
GoPubMedNAA25
iHOPNAA25
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:34:25 CET 2017

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