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NAA60 (N(alpha)-acetyltransferase 60, NatF catalytic subunit)

Identity

Alias_namesNAT15
N-acetyltransferase 15 (GCN5-related
Alias_symbol (synonym)FLJ14154
Other aliasHAT4
NatF
hNaa60
HGNC (Hugo) NAA60
LocusID (NCBI) 79903
Atlas_Id 56297
Location 16p13.3  [Link to chromosome band 16p13]
Location_base_pair Starts at 3457985 and ends at 3486963 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CLUAP1 (16p13.3) / NAA60 (16p13.3)DBNDD1 (16q24.3) / NAA60 (16p13.3)NAA60 (16p13.3) / AMD1 (6q21)
NAA60 (16p13.3) / FKBP3 (14q21.2)NAA60 (16p13.3) / IL32 (16p13.3)RAB11FIP3 (16p13.3) / NAA60 (16p13.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NAA60   25875
LRG (Locus Reference Genomic)LRG_1067
Cards
Entrez_Gene (NCBI)NAA60  79903  N(alpha)-acetyltransferase 60, NatF catalytic subunit
AliasesHAT4; NAT15; NatF; hNaa60
GeneCards (Weizmann)NAA60
Ensembl hg19 (Hinxton)ENSG00000122390 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000122390 [Gene_View]  chr16:3457985-3486963 [Contig_View]  NAA60 [Vega]
ICGC DataPortalENSG00000122390
TCGA cBioPortalNAA60
AceView (NCBI)NAA60
Genatlas (Paris)NAA60
WikiGenes79903
SOURCE (Princeton)NAA60
Genetics Home Reference (NIH)NAA60
Genomic and cartography
GoldenPath hg38 (UCSC)NAA60  -     chr16:3457985-3486963 +  16p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NAA60  -     16p13.3   [Description]    (hg19-Feb_2009)
EnsemblNAA60 - 16p13.3 [CytoView hg19]  NAA60 - 16p13.3 [CytoView hg38]
Mapping of homologs : NCBINAA60 [Mapview hg19]  NAA60 [Mapview hg38]
OMIM614246   
Gene and transcription
Genbank (Entrez)AK021755 AK024216 AK092005 AK095819 AK130792
RefSeq transcript (Entrez)NM_001083600 NM_001083601 NM_001317093 NM_001317094 NM_001317095 NM_001317096 NM_001317097 NM_001317098 NM_024845
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NAA60
Cluster EST : UnigeneHs.513296 [ NCBI ]
CGAP (NCI)Hs.513296
Alternative Splicing GalleryENSG00000122390
Gene ExpressionNAA60 [ NCBI-GEO ]   NAA60 [ EBI - ARRAY_EXPRESS ]   NAA60 [ SEEK ]   NAA60 [ MEM ]
Gene Expression Viewer (FireBrowse)NAA60 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79903
GTEX Portal (Tissue expression)NAA60
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H7X0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H7X0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H7X0
Splice isoforms : SwissVarQ9H7X0
PhosPhoSitePlusQ9H7X0
Domaine pattern : Prosite (Expaxy)GNAT (PS51186)   
Domains : Interpro (EBI)Acyl_CoA_acyltransferase    GNAT_dom   
Domain families : Pfam (Sanger)Acetyltransf_1 (PF00583)   
Domain families : Pfam (NCBI)pfam00583   
Conserved Domain (NCBI)NAA60
DMDM Disease mutations79903
Blocks (Seattle)NAA60
PDB (SRS)5HGZ    5HH0    5HH1    5ICV    5ICW   
PDB (PDBSum)5HGZ    5HH0    5HH1    5ICV    5ICW   
PDB (IMB)5HGZ    5HH0    5HH1    5ICV    5ICW   
PDB (RSDB)5HGZ    5HH0    5HH1    5ICV    5ICW   
Structural Biology KnowledgeBase5HGZ    5HH0    5HH1    5ICV    5ICW   
SCOP (Structural Classification of Proteins)5HGZ    5HH0    5HH1    5ICV    5ICW   
CATH (Classification of proteins structures)5HGZ    5HH0    5HH1    5ICV    5ICW   
SuperfamilyQ9H7X0
Human Protein AtlasENSG00000122390
Peptide AtlasQ9H7X0
HPRD07852
IPIIPI00155437   IPI00641840   IPI00910555   IPI00909935   IPI00984073   
Protein Interaction databases
DIP (DOE-UCLA)Q9H7X0
IntAct (EBI)Q9H7X0
FunCoupENSG00000122390
BioGRIDNAA60
STRING (EMBL)NAA60
ZODIACNAA60
Ontologies - Pathways
QuickGOQ9H7X0
Ontology : AmiGOGolgi membrane  peptide alpha-N-acetyltransferase activity  nucleosome assembly  N-terminal protein amino acid acetylation  chromosome segregation  cell proliferation  H4 histone acetyltransferase activity  N-terminal peptidyl-methionine acetylation  protein homodimerization activity  histone H4 acetylation  
Ontology : EGO-EBIGolgi membrane  peptide alpha-N-acetyltransferase activity  nucleosome assembly  N-terminal protein amino acid acetylation  chromosome segregation  cell proliferation  H4 histone acetyltransferase activity  N-terminal peptidyl-methionine acetylation  protein homodimerization activity  histone H4 acetylation  
NDEx NetworkNAA60
Atlas of Cancer Signalling NetworkNAA60
Wikipedia pathwaysNAA60
Orthology - Evolution
OrthoDB79903
GeneTree (enSembl)ENSG00000122390
Phylogenetic Trees/Animal Genes : TreeFamNAA60
HOVERGENQ9H7X0
HOGENOMQ9H7X0
Homologs : HomoloGeneNAA60
Homology/Alignments : Family Browser (UCSC)NAA60
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNAA60 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NAA60
dbVarNAA60
ClinVarNAA60
1000_GenomesNAA60 
Exome Variant ServerNAA60
ExAC (Exome Aggregation Consortium)NAA60 (select the gene name)
Genetic variants : HAPMAP79903
Genomic Variants (DGV)NAA60 [DGVbeta]
DECIPHERNAA60 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNAA60 
Mutations
ICGC Data PortalNAA60 
TCGA Data PortalNAA60 
Broad Tumor PortalNAA60
OASIS PortalNAA60 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNAA60  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNAA60
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NAA60
DgiDB (Drug Gene Interaction Database)NAA60
DoCM (Curated mutations)NAA60 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NAA60 (select a term)
intoGenNAA60
Cancer3DNAA60(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614246   
Orphanet
MedgenNAA60
Genetic Testing Registry NAA60
NextProtQ9H7X0 [Medical]
TSGene79903
GENETestsNAA60
Target ValidationNAA60
Huge Navigator NAA60 [HugePedia]
snp3D : Map Gene to Disease79903
BioCentury BCIQNAA60
ClinGenNAA60
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79903
Chemical/Pharm GKB GenePA164723438
Clinical trialNAA60
Miscellaneous
canSAR (ICR)NAA60 (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNAA60
EVEXNAA60
GoPubMedNAA60
iHOPNAA60
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:45:59 CEST 2017

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