Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

NAA80 (N(alpha)-acetyltransferase 80, NatH catalytic subunit)

Identity

Alias_namesN-acetyltransferase 6
N-acetyltransferase 6 (GCN5-related)
Alias_symbol (synonym)FUS2
Other aliasFUS-2
NAT6
HGNC (Hugo) NAA80
LocusID (NCBI) 24142
Atlas_Id 40647
Location 3p21.31  [Link to chromosome band 3p21]
Location_base_pair Starts at 50296402 and ends at 50299421 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)NAA80   30252
Cards
Entrez_Gene (NCBI)NAA80  24142  N(alpha)-acetyltransferase 80, NatH catalytic subunit
AliasesFUS-2; FUS2; NAT6
GeneCards (Weizmann)NAA80
Ensembl hg19 (Hinxton)ENSG00000243477 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000243477 [Gene_View]  ENSG00000243477 [Sequence]  chr3:50296402-50299421 [Contig_View]  NAA80 [Vega]
ICGC DataPortalENSG00000243477
TCGA cBioPortalNAA80
AceView (NCBI)NAA80
Genatlas (Paris)NAA80
WikiGenes24142
SOURCE (Princeton)NAA80
Genetics Home Reference (NIH)NAA80
Genomic and cartography
GoldenPath hg38 (UCSC)NAA80  -     chr3:50296402-50299421 -  3p21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NAA80  -     3p21.31   [Description]    (hg19-Feb_2009)
EnsemblNAA80 - 3p21.31 [CytoView hg19]  NAA80 - 3p21.31 [CytoView hg38]
Mapping of homologs : NCBINAA80 [Mapview hg19]  NAA80 [Mapview hg38]
OMIM607073   
Gene and transcription
Genbank (Entrez)AF040705 AF040706 AK313803 BC004483 BC035689
RefSeq transcript (Entrez)NM_001200016 NM_001200018 NM_012191
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NAA80
Cluster EST : UnigeneHs.736942 [ NCBI ]
CGAP (NCI)Hs.736942
Alternative Splicing GalleryENSG00000243477
Gene ExpressionNAA80 [ NCBI-GEO ]   NAA80 [ EBI - ARRAY_EXPRESS ]   NAA80 [ SEEK ]   NAA80 [ MEM ]
Gene Expression Viewer (FireBrowse)NAA80 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)24142
GTEX Portal (Tissue expression)NAA80
Human Protein AtlasENSG00000243477-NAA80 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ93015   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ93015  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ93015
Splice isoforms : SwissVarQ93015
Catalytic activity : Enzyme2.3.1.- [ Enzyme-Expasy ]   2.3.1.-2.3.1.- [ IntEnz-EBI ]   2.3.1.- [ BRENDA ]   2.3.1.- [ KEGG ]   
PhosPhoSitePlusQ93015
Domaine pattern : Prosite (Expaxy)GNAT (PS51186)   
Domains : Interpro (EBI)Acyl_CoA_acyltransferase    GNAT_dom   
Domain families : Pfam (Sanger)Acetyltransf_1 (PF00583)   
Domain families : Pfam (NCBI)pfam00583   
Conserved Domain (NCBI)NAA80
DMDM Disease mutations24142
Blocks (Seattle)NAA80
SuperfamilyQ93015
Human Protein Atlas [tissue]ENSG00000243477-NAA80 [tissue]
Peptide AtlasQ93015
HPRD06148
IPIIPI00016688   IPI00784611   IPI00926535   IPI00926321   IPI00926147   
Protein Interaction databases
DIP (DOE-UCLA)Q93015
IntAct (EBI)Q93015
FunCoupENSG00000243477
BioGRIDNAA80
STRING (EMBL)NAA80
ZODIACNAA80
Ontologies - Pathways
QuickGOQ93015
Ontology : AmiGOcytoplasm  protein acetylation  N-acetyltransferase activity  acetyl-CoA binding  
Ontology : EGO-EBIcytoplasm  protein acetylation  N-acetyltransferase activity  acetyl-CoA binding  
NDEx NetworkNAA80
Atlas of Cancer Signalling NetworkNAA80
Wikipedia pathwaysNAA80
Orthology - Evolution
OrthoDB24142
GeneTree (enSembl)ENSG00000243477
Phylogenetic Trees/Animal Genes : TreeFamNAA80
HOVERGENQ93015
HOGENOMQ93015
Homologs : HomoloGeneNAA80
Homology/Alignments : Family Browser (UCSC)NAA80
Gene fusions - Rearrangements
Fusion : QuiverNAA80
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNAA80 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NAA80
dbVarNAA80
ClinVarNAA80
1000_GenomesNAA80 
Exome Variant ServerNAA80
ExAC (Exome Aggregation Consortium)ENSG00000243477
GNOMAD BrowserENSG00000243477
Varsome BrowserNAA80
Genetic variants : HAPMAP24142
Genomic Variants (DGV)NAA80 [DGVbeta]
DECIPHERNAA80 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNAA80 
Mutations
ICGC Data PortalNAA80 
TCGA Data PortalNAA80 
Broad Tumor PortalNAA80
OASIS PortalNAA80 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDNAA80
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NAA80
DgiDB (Drug Gene Interaction Database)NAA80
DoCM (Curated mutations)NAA80 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NAA80 (select a term)
intoGenNAA80
Cancer3DNAA80(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607073   
Orphanet
DisGeNETNAA80
MedgenNAA80
Genetic Testing Registry NAA80
NextProtQ93015 [Medical]
TSGene24142
GENETestsNAA80
Target ValidationNAA80
Huge Navigator NAA80 [HugePedia]
snp3D : Map Gene to Disease24142
BioCentury BCIQNAA80
ClinGenNAA80
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD24142
Chemical/Pharm GKB GenePA134979782
Clinical trialNAA80
Miscellaneous
canSAR (ICR)NAA80 (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNAA80
EVEXNAA80
GoPubMedNAA80
iHOPNAA80
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Aug 27 11:39:37 CEST 2018

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.