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NAALADL1 (N-acetylated alpha-linked acidic dipeptidase like 1)

Identity

Other aliasI100
NAALADASEL
HGNC (Hugo) NAALADL1
LocusID (NCBI) 10004
Atlas_Id 70661
Location 11q13.1  [Link to chromosome band 11q13]
Location_base_pair Starts at 65044823 and ends at 65058537 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
SNX15 (11q13.1) / NAALADL1 (11q13.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NAALADL1   23536
Cards
Entrez_Gene (NCBI)NAALADL1  10004  N-acetylated alpha-linked acidic dipeptidase like 1
AliasesI100; NAALADASEL
GeneCards (Weizmann)NAALADL1
Ensembl hg19 (Hinxton)ENSG00000168060 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000168060 [Gene_View]  chr11:65044823-65058537 [Contig_View]  NAALADL1 [Vega]
ICGC DataPortalENSG00000168060
TCGA cBioPortalNAALADL1
AceView (NCBI)NAALADL1
Genatlas (Paris)NAALADL1
WikiGenes10004
SOURCE (Princeton)NAALADL1
Genetics Home Reference (NIH)NAALADL1
Genomic and cartography
GoldenPath hg38 (UCSC)NAALADL1  -     chr11:65044823-65058537 -  11q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NAALADL1  -     11q13.1   [Description]    (hg19-Feb_2009)
EnsemblNAALADL1 - 11q13.1 [CytoView hg19]  NAALADL1 - 11q13.1 [CytoView hg38]
Mapping of homologs : NCBINAALADL1 [Mapview hg19]  NAALADL1 [Mapview hg38]
OMIM602640   
Gene and transcription
Genbank (Entrez)AF010141 AJ012371 AK309536 AK311090 BC140321
RefSeq transcript (Entrez)NM_005468
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NAALADL1
Cluster EST : UnigeneHs.13967 [ NCBI ]
CGAP (NCI)Hs.13967
Alternative Splicing GalleryENSG00000168060
Gene ExpressionNAALADL1 [ NCBI-GEO ]   NAALADL1 [ EBI - ARRAY_EXPRESS ]   NAALADL1 [ SEEK ]   NAALADL1 [ MEM ]
Gene Expression Viewer (FireBrowse)NAALADL1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10004
GTEX Portal (Tissue expression)NAALADL1
Human Protein AtlasENSG00000168060-NAALADL1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UQQ1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UQQ1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UQQ1
Splice isoforms : SwissVarQ9UQQ1
Catalytic activity : Enzyme3.4.17.21 [ Enzyme-Expasy ]   3.4.17.213.4.17.21 [ IntEnz-EBI ]   3.4.17.21 [ BRENDA ]   3.4.17.21 [ KEGG ]   
PhosPhoSitePlusQ9UQQ1
Domains : Interpro (EBI)PA_domain    Peptidase_M28    TFR-like_dimer_dom   
Domain families : Pfam (Sanger)PA (PF02225)    Peptidase_M28 (PF04389)    TFR_dimer (PF04253)   
Domain families : Pfam (NCBI)pfam02225    pfam04389    pfam04253   
Conserved Domain (NCBI)NAALADL1
DMDM Disease mutations10004
Blocks (Seattle)NAALADL1
PDB (SRS)4TWE   
PDB (PDBSum)4TWE   
PDB (IMB)4TWE   
PDB (RSDB)4TWE   
Structural Biology KnowledgeBase4TWE   
SCOP (Structural Classification of Proteins)4TWE   
CATH (Classification of proteins structures)4TWE   
SuperfamilyQ9UQQ1
Human Protein Atlas [tissue]ENSG00000168060-NAALADL1 [tissue]
Peptide AtlasQ9UQQ1
HPRD07212
IPIIPI00023152   IPI00216497   IPI00216498   IPI00216499   IPI00216500   IPI00216502   IPI00413011   IPI00952635   IPI00983131   IPI00976314   IPI00952797   IPI00976867   IPI00984338   IPI00980214   IPI00981164   IPI00977451   IPI00975706   
Protein Interaction databases
DIP (DOE-UCLA)Q9UQQ1
IntAct (EBI)Q9UQQ1
FunCoupENSG00000168060
BioGRIDNAALADL1
STRING (EMBL)NAALADL1
ZODIACNAALADL1
Ontologies - Pathways
QuickGOQ9UQQ1
Ontology : AmiGOcarboxypeptidase activity  proteolysis  peptidase activity  metallopeptidase activity  integral component of membrane  apical plasma membrane  dipeptidase activity  metal ion binding  
Ontology : EGO-EBIcarboxypeptidase activity  proteolysis  peptidase activity  metallopeptidase activity  integral component of membrane  apical plasma membrane  dipeptidase activity  metal ion binding  
NDEx NetworkNAALADL1
Atlas of Cancer Signalling NetworkNAALADL1
Wikipedia pathwaysNAALADL1
Orthology - Evolution
OrthoDB10004
GeneTree (enSembl)ENSG00000168060
Phylogenetic Trees/Animal Genes : TreeFamNAALADL1
HOVERGENQ9UQQ1
HOGENOMQ9UQQ1
Homologs : HomoloGeneNAALADL1
Homology/Alignments : Family Browser (UCSC)NAALADL1
Gene fusions - Rearrangements
Tumor Fusion PortalNAALADL1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNAALADL1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NAALADL1
dbVarNAALADL1
ClinVarNAALADL1
1000_GenomesNAALADL1 
Exome Variant ServerNAALADL1
ExAC (Exome Aggregation Consortium)ENSG00000168060
GNOMAD BrowserENSG00000168060
Genetic variants : HAPMAP10004
Genomic Variants (DGV)NAALADL1 [DGVbeta]
DECIPHERNAALADL1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNAALADL1 
Mutations
ICGC Data PortalNAALADL1 
TCGA Data PortalNAALADL1 
Broad Tumor PortalNAALADL1
OASIS PortalNAALADL1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNAALADL1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNAALADL1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NAALADL1
DgiDB (Drug Gene Interaction Database)NAALADL1
DoCM (Curated mutations)NAALADL1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NAALADL1 (select a term)
intoGenNAALADL1
Cancer3DNAALADL1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602640   
Orphanet
DisGeNETNAALADL1
MedgenNAALADL1
Genetic Testing Registry NAALADL1
NextProtQ9UQQ1 [Medical]
TSGene10004
GENETestsNAALADL1
Target ValidationNAALADL1
Huge Navigator NAALADL1 [HugePedia]
snp3D : Map Gene to Disease10004
BioCentury BCIQNAALADL1
ClinGenNAALADL1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10004
Chemical/Pharm GKB GenePA134867982
Clinical trialNAALADL1
Miscellaneous
canSAR (ICR)NAALADL1 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNAALADL1
EVEXNAALADL1
GoPubMedNAALADL1
iHOPNAALADL1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:24:13 CET 2017

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