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NACA2 (nascent polypeptide associated complex alpha subunit 2)

Identity

Alias_namesNACAL
nascent-polypeptide-associated complex alpha polypeptide-like
nascent polypeptide-associated complex alpha subunit 2
Alias_symbol (synonym)MGC71999
Other aliasANAC
HGNC (Hugo) NACA2
LocusID (NCBI) 342538
Atlas_Id 70666
Location 17q23.2  [Link to chromosome band 17q23]
Location_base_pair Starts at 61590433 and ends at 61591202 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NACA2   23290
Cards
Entrez_Gene (NCBI)NACA2  342538  nascent polypeptide associated complex alpha subunit 2
AliasesANAC; NACAL
GeneCards (Weizmann)NACA2
Ensembl hg19 (Hinxton)ENSG00000253506 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000253506 [Gene_View]  chr17:61590433-61591202 [Contig_View]  NACA2 [Vega]
ICGC DataPortalENSG00000253506
TCGA cBioPortalNACA2
AceView (NCBI)NACA2
Genatlas (Paris)NACA2
WikiGenes342538
SOURCE (Princeton)NACA2
Genetics Home Reference (NIH)NACA2
Genomic and cartography
GoldenPath hg38 (UCSC)NACA2  -     chr17:61590433-61591202 -  17q23.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NACA2  -     17q23.2   [Description]    (hg19-Feb_2009)
EnsemblNACA2 - 17q23.2 [CytoView hg19]  NACA2 - 17q23.2 [CytoView hg38]
Mapping of homologs : NCBINACA2 [Mapview hg19]  NACA2 [Mapview hg38]
OMIM609274   
Gene and transcription
Genbank (Entrez)BC062710 HQ447566
RefSeq transcript (Entrez)NM_199290
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NACA2
Cluster EST : UnigeneHs.591178 [ NCBI ]
CGAP (NCI)Hs.591178
Alternative Splicing GalleryENSG00000253506
Gene ExpressionNACA2 [ NCBI-GEO ]   NACA2 [ EBI - ARRAY_EXPRESS ]   NACA2 [ SEEK ]   NACA2 [ MEM ]
Gene Expression Viewer (FireBrowse)NACA2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)342538
GTEX Portal (Tissue expression)NACA2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H009   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H009  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H009
Splice isoforms : SwissVarQ9H009
PhosPhoSitePlusQ9H009
Domaine pattern : Prosite (Expaxy)NAC_AB (PS51151)   
Domains : Interpro (EBI)EGD2/NACA    Nas_poly-pep-assoc_cplx_dom   
Domain families : Pfam (Sanger)NAC (PF01849)   
Domain families : Pfam (NCBI)pfam01849   
Domain families : Smart (EMBL)NAC (SM01407)  
Conserved Domain (NCBI)NACA2
DMDM Disease mutations342538
Blocks (Seattle)NACA2
SuperfamilyQ9H009
Human Protein AtlasENSG00000253506
Peptide AtlasQ9H009
HPRD16487
IPIIPI00007471   
Protein Interaction databases
DIP (DOE-UCLA)Q9H009
IntAct (EBI)Q9H009
FunCoupENSG00000253506
BioGRIDNACA2
STRING (EMBL)NACA2
ZODIACNACA2
Ontologies - Pathways
QuickGOQ9H009
Ontology : AmiGOnucleus  cytoplasm  protein transport  
Ontology : EGO-EBInucleus  cytoplasm  protein transport  
NDEx NetworkNACA2
Atlas of Cancer Signalling NetworkNACA2
Wikipedia pathwaysNACA2
Orthology - Evolution
OrthoDB342538
GeneTree (enSembl)ENSG00000253506
Phylogenetic Trees/Animal Genes : TreeFamNACA2
HOVERGENQ9H009
HOGENOMQ9H009
Homologs : HomoloGeneNACA2
Homology/Alignments : Family Browser (UCSC)NACA2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNACA2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NACA2
dbVarNACA2
ClinVarNACA2
1000_GenomesNACA2 
Exome Variant ServerNACA2
ExAC (Exome Aggregation Consortium)NACA2 (select the gene name)
Genetic variants : HAPMAP342538
Genomic Variants (DGV)NACA2 [DGVbeta]
DECIPHERNACA2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNACA2 
Mutations
ICGC Data PortalNACA2 
TCGA Data PortalNACA2 
Broad Tumor PortalNACA2
OASIS PortalNACA2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNACA2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNACA2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NACA2
DgiDB (Drug Gene Interaction Database)NACA2
DoCM (Curated mutations)NACA2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NACA2 (select a term)
intoGenNACA2
Cancer3DNACA2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609274   
Orphanet
MedgenNACA2
Genetic Testing Registry NACA2
NextProtQ9H009 [Medical]
TSGene342538
GENETestsNACA2
Target ValidationNACA2
Huge Navigator NACA2 [HugePedia]
snp3D : Map Gene to Disease342538
BioCentury BCIQNACA2
ClinGenNACA2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD342538
Chemical/Pharm GKB GenePA162396699
Clinical trialNACA2
Miscellaneous
canSAR (ICR)NACA2 (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNACA2
EVEXNACA2
GoPubMedNACA2
iHOPNACA2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:32:11 CEST 2017

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