Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

NACAD (NAC alpha domain containing)

Identity

Alias_symbol (synonym)KIAA0363
Other alias-
HGNC (Hugo) NACAD
LocusID (NCBI) 23148
Atlas_Id 70667
Location 7p13  [Link to chromosome band 7p13]
Location_base_pair Starts at 45120036 and ends at 45128493 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NACAD   22196
Cards
Entrez_Gene (NCBI)NACAD  23148  NAC alpha domain containing
Aliases
GeneCards (Weizmann)NACAD
Ensembl hg19 (Hinxton)ENSG00000136274 [Gene_View]  chr7:45120036-45128493 [Contig_View]  NACAD [Vega]
Ensembl hg38 (Hinxton)ENSG00000136274 [Gene_View]  chr7:45120036-45128493 [Contig_View]  NACAD [Vega]
ICGC DataPortalENSG00000136274
TCGA cBioPortalNACAD
AceView (NCBI)NACAD
Genatlas (Paris)NACAD
WikiGenes23148
SOURCE (Princeton)NACAD
Genetics Home Reference (NIH)NACAD
Genomic and cartography
GoldenPath hg19 (UCSC)NACAD  -     chr7:45120036-45128493 -  7p13   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)NACAD  -     7p13   [Description]    (hg38-Dec_2013)
EnsemblNACAD - 7p13 [CytoView hg19]  NACAD - 7p13 [CytoView hg38]
Mapping of homologs : NCBINACAD [Mapview hg19]  NACAD [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB002361 BM680676 BM728120 EG328798
RefSeq transcript (Entrez)NM_001146334
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007819 NW_004929329
Consensus coding sequences : CCDS (NCBI)NACAD
Cluster EST : UnigeneHs.96633 [ NCBI ]
CGAP (NCI)Hs.96633
Alternative Splicing GalleryENSG00000136274
Gene ExpressionNACAD [ NCBI-GEO ]   NACAD [ EBI - ARRAY_EXPRESS ]   NACAD [ SEEK ]   NACAD [ MEM ]
Gene Expression Viewer (FireBrowse)NACAD [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23148
GTEX Portal (Tissue expression)NACAD
Protein : pattern, domain, 3D structure
UniProt/SwissProtO15069   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO15069  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO15069
Splice isoforms : SwissVarO15069
PhosPhoSitePlusO15069
Domaine pattern : Prosite (Expaxy)NAC_AB (PS51151)   
Domains : Interpro (EBI)EGD2/NACA    Nas_poly-pep-assoc_cplx_dom   
Domain families : Pfam (Sanger)NAC (PF01849)   
Domain families : Pfam (NCBI)pfam01849   
Conserved Domain (NCBI)NACAD
DMDM Disease mutations23148
Blocks (Seattle)NACAD
SuperfamilyO15069
Human Protein AtlasENSG00000136274
Peptide AtlasO15069
IPIIPI00929627   
Protein Interaction databases
DIP (DOE-UCLA)O15069
IntAct (EBI)O15069
FunCoupENSG00000136274
BioGRIDNACAD
STRING (EMBL)NACAD
ZODIACNACAD
Ontologies - Pathways
QuickGOO15069
Ontology : AmiGOnucleus  cytoplasm  protein transport  
Ontology : EGO-EBInucleus  cytoplasm  protein transport  
NDEx NetworkNACAD
Atlas of Cancer Signalling NetworkNACAD
Wikipedia pathwaysNACAD
Orthology - Evolution
OrthoDB23148
GeneTree (enSembl)ENSG00000136274
Phylogenetic Trees/Animal Genes : TreeFamNACAD
HOVERGENO15069
HOGENOMO15069
Homologs : HomoloGeneNACAD
Homology/Alignments : Family Browser (UCSC)NACAD
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNACAD [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NACAD
dbVarNACAD
ClinVarNACAD
1000_GenomesNACAD 
Exome Variant ServerNACAD
ExAC (Exome Aggregation Consortium)NACAD (select the gene name)
Genetic variants : HAPMAP23148
Genomic Variants (DGV)NACAD [DGVbeta]
DECIPHER (Syndromes)7:45120036-45128493  ENSG00000136274
CONAN: Copy Number AnalysisNACAD 
Mutations
ICGC Data PortalNACAD 
TCGA Data PortalNACAD 
Broad Tumor PortalNACAD
OASIS PortalNACAD [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNACAD  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNACAD
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NACAD
DgiDB (Drug Gene Interaction Database)NACAD
DoCM (Curated mutations)NACAD (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NACAD (select a term)
intoGenNACAD
Cancer3DNACAD(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenNACAD
Genetic Testing Registry NACAD
NextProtO15069 [Medical]
TSGene23148
GENETestsNACAD
Huge Navigator NACAD [HugePedia]
snp3D : Map Gene to Disease23148
BioCentury BCIQNACAD
ClinGenNACAD
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD23148
Chemical/Pharm GKB GenePA162396706
Clinical trialNACAD
Miscellaneous
canSAR (ICR)NACAD (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNACAD
EVEXNACAD
GoPubMedNACAD
iHOPNACAD
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:34:27 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.