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NACAP1 (-)

Identity

Alias_namesnascent-polypeptide-associated complex alpha polypeptide pseudogene 1
Alias_symbol (synonym)FKSG17
Other alias-
HGNC (Hugo) -
LocusID (NCBI) 83955
Atlas_Id 54486
Location 12q13.3  [Link to chromosome band 12q13]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
GSE1 (16q24.1) / NACAP1 (8q22.3)NACA (12q13.3) / NACAP1 (8q22.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 2 ]
  Lung: Translocations in Squamous Cell Carcinoma
t(8;16)(q22;q24) GSE1/NACAP1


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)NACAP1  83955  -
Aliases
GeneCards (Weizmann)NACAP1
Ensembl hg19 (Hinxton)ENSG00000228224 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000228224 [Gene_View]  ENSG00000228224 [Sequence]  - [Contig_View]  NACAP1 [Vega]
ICGC DataPortalENSG00000228224
TCGA cBioPortalNACAP1
AceView (NCBI)NACAP1
Genatlas (Paris)NACAP1
WikiGenes83955
SOURCE (Princeton)NACAP1
Genetics Home Reference (NIH)NACAP1
Genomic and cartography
GoldenPath hg38 (UCSC)NACAP1  -  
GoldenPath hg19 (UCSC)NACAP1  -  
EnsemblNACAP1 - [CytoView hg19]  NACAP1 - [CytoView hg38]
Mapping of homologs : NCBINACAP1 [Mapview hg19]  NACAP1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NACAP1
Alternative Splicing GalleryENSG00000228224
Gene ExpressionNACAP1 [ NCBI-GEO ]   NACAP1 [ EBI - ARRAY_EXPRESS ]   NACAP1 [ SEEK ]   NACAP1 [ MEM ]
Gene Expression Viewer (FireBrowse)NACAP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)83955
GTEX Portal (Tissue expression)NACAP1
Human Protein AtlasENSG00000228224-NACAP1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NACAP1
DMDM Disease mutations83955
Blocks (Seattle)NACAP1
Human Protein Atlas [tissue]ENSG00000228224-NACAP1 [tissue]
Protein Interaction databases
FunCoupENSG00000228224
BioGRIDNACAP1
STRING (EMBL)NACAP1
ZODIACNACAP1
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease83955
BioCentury BCIQNACAP1
ClinGenNACAP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD83955
Clinical trialNACAP1
Miscellaneous
canSAR (ICR)NACAP1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineNACAP1
EVEXNACAP1
GoPubMedNACAP1
iHOPNACAP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Aug 16 11:18:44 CEST 2018

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