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NAGK (N-acetylglucosamine kinase)

Identity

Alias_symbol (synonym)GNK
Other aliasHSA242910
HGNC (Hugo) NAGK
LocusID (NCBI) 55577
Atlas_Id 70673
Location 2p13.3  [Link to chromosome band 2p13]
Location_base_pair Starts at 71068278 and ends at 71078868 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
NAGK (2p13.3) / NAGK (2p13.3)PFN1 (17p13.2) / NAGK (2p13.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NAGK   17174
Cards
Entrez_Gene (NCBI)NAGK  55577  N-acetylglucosamine kinase
AliasesGNK; HSA242910
GeneCards (Weizmann)NAGK
Ensembl hg19 (Hinxton)ENSG00000124357 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000124357 [Gene_View]  chr2:71068278-71078868 [Contig_View]  NAGK [Vega]
ICGC DataPortalENSG00000124357
TCGA cBioPortalNAGK
AceView (NCBI)NAGK
Genatlas (Paris)NAGK
WikiGenes55577
SOURCE (Princeton)NAGK
Genetics Home Reference (NIH)NAGK
Genomic and cartography
GoldenPath hg38 (UCSC)NAGK  -     chr2:71068278-71078868 +  2p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NAGK  -     2p13.3   [Description]    (hg19-Feb_2009)
EnsemblNAGK - 2p13.3 [CytoView hg19]  NAGK - 2p13.3 [CytoView hg38]
Mapping of homologs : NCBINAGK [Mapview hg19]  NAGK [Mapview hg38]
OMIM606828   
Gene and transcription
Genbank (Entrez)AA641666 AJ242910 AK001812 AK092876 AK097223
RefSeq transcript (Entrez)NM_001330425 NM_001330426 NM_017567
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NAGK
Cluster EST : UnigeneHs.7036 [ NCBI ]
CGAP (NCI)Hs.7036
Alternative Splicing GalleryENSG00000124357
Gene ExpressionNAGK [ NCBI-GEO ]   NAGK [ EBI - ARRAY_EXPRESS ]   NAGK [ SEEK ]   NAGK [ MEM ]
Gene Expression Viewer (FireBrowse)NAGK [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55577
GTEX Portal (Tissue expression)NAGK
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UJ70   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UJ70  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UJ70
Splice isoforms : SwissVarQ9UJ70
Catalytic activity : Enzyme2.7.1.59 [ Enzyme-Expasy ]   2.7.1.592.7.1.59 [ IntEnz-EBI ]   2.7.1.59 [ BRENDA ]   2.7.1.59 [ KEGG ]   
PhosPhoSitePlusQ9UJ70
Domains : Interpro (EBI)ATPase_BadF   
Domain families : Pfam (Sanger)BcrAD_BadFG (PF01869)   
Domain families : Pfam (NCBI)pfam01869   
Conserved Domain (NCBI)NAGK
DMDM Disease mutations55577
Blocks (Seattle)NAGK
PDB (SRS)2CH5    2CH6   
PDB (PDBSum)2CH5    2CH6   
PDB (IMB)2CH5    2CH6   
PDB (RSDB)2CH5    2CH6   
Structural Biology KnowledgeBase2CH5    2CH6   
SCOP (Structural Classification of Proteins)2CH5    2CH6   
CATH (Classification of proteins structures)2CH5    2CH6   
SuperfamilyQ9UJ70
Human Protein AtlasENSG00000124357
Peptide AtlasQ9UJ70
HPRD08441
IPIIPI00939575   IPI00441875   IPI00926519   IPI00927109   IPI00296526   IPI00924569   IPI01009115   IPI00974113   IPI00979510   IPI00980035   IPI01011675   IPI00978807   
Protein Interaction databases
DIP (DOE-UCLA)Q9UJ70
IntAct (EBI)Q9UJ70
FunCoupENSG00000124357
BioGRIDNAGK
STRING (EMBL)NAGK
ZODIACNAGK
Ontologies - Pathways
QuickGOQ9UJ70
Ontology : AmiGOprotein binding  ATP binding  cytosol  N-acetylglucosamine metabolic process  UDP-N-acetylglucosamine biosynthetic process  N-acetylmannosamine metabolic process  N-acylmannosamine kinase activity  N-acetylneuraminate catabolic process  N-acetylneuraminate catabolic process  N-acetylglucosamine kinase activity  N-acetylglucosamine kinase activity  carbohydrate phosphorylation  extracellular exosome  
Ontology : EGO-EBIprotein binding  ATP binding  cytosol  N-acetylglucosamine metabolic process  UDP-N-acetylglucosamine biosynthetic process  N-acetylmannosamine metabolic process  N-acylmannosamine kinase activity  N-acetylneuraminate catabolic process  N-acetylneuraminate catabolic process  N-acetylglucosamine kinase activity  N-acetylglucosamine kinase activity  carbohydrate phosphorylation  extracellular exosome  
Pathways : KEGGAmino sugar and nucleotide sugar metabolism   
NDEx NetworkNAGK
Atlas of Cancer Signalling NetworkNAGK
Wikipedia pathwaysNAGK
Orthology - Evolution
OrthoDB55577
GeneTree (enSembl)ENSG00000124357
Phylogenetic Trees/Animal Genes : TreeFamNAGK
HOVERGENQ9UJ70
HOGENOMQ9UJ70
Homologs : HomoloGeneNAGK
Homology/Alignments : Family Browser (UCSC)NAGK
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNAGK [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NAGK
dbVarNAGK
ClinVarNAGK
1000_GenomesNAGK 
Exome Variant ServerNAGK
ExAC (Exome Aggregation Consortium)NAGK (select the gene name)
Genetic variants : HAPMAP55577
Genomic Variants (DGV)NAGK [DGVbeta]
DECIPHERNAGK [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNAGK 
Mutations
ICGC Data PortalNAGK 
TCGA Data PortalNAGK 
Broad Tumor PortalNAGK
OASIS PortalNAGK [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNAGK  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNAGK
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NAGK
DgiDB (Drug Gene Interaction Database)NAGK
DoCM (Curated mutations)NAGK (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NAGK (select a term)
intoGenNAGK
Cancer3DNAGK(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606828   
Orphanet
MedgenNAGK
Genetic Testing Registry NAGK
NextProtQ9UJ70 [Medical]
TSGene55577
GENETestsNAGK
Huge Navigator NAGK [HugePedia]
snp3D : Map Gene to Disease55577
BioCentury BCIQNAGK
ClinGenNAGK
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55577
Chemical/Pharm GKB GenePA31436
Clinical trialNAGK
Miscellaneous
canSAR (ICR)NAGK (select the gene name)
Probes
Litterature
PubMed31 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNAGK
EVEXNAGK
GoPubMedNAGK
iHOPNAGK
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 11:44:31 CEST 2017

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