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NALT1 (NOTCH1 associated lncRNA in T cell acute lymphoblastic leukemia 1)

Identity

Alias (NCBI)LINC01573
MIR4674HG
NALT
TCONS_l2_00029132
HGNC (Hugo) NALT1
HGNC Alias symbTCONS_l2_00029132
HGNC Previous nameMIR4674HG
 LINC01573
HGNC Previous nameMIR4674 host gene (non-protein coding)
 long intergenic non-protein coding RNA 1573
LocusID (NCBI) 101928483
Atlas_Id 55446
Location 9q34.3  [Link to chromosome band 9q34]
Location_base_pair Starts at 136547842 and ends at 136549744 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)NALT1   51192
Cards
Entrez_Gene (NCBI)NALT1    NOTCH1 associated lncRNA in T cell acute lymphoblastic leukemia 1
AliasesLINC01573; MIR4674HG; NALT; TCONS_l2_00029132
GeneCards (Weizmann)NALT1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr9:136547842-136549744 [Contig_View]  NALT1 [Vega]
TCGA cBioPortalNALT1
AceView (NCBI)NALT1
Genatlas (Paris)NALT1
SOURCE (Princeton)NALT1
Genetics Home Reference (NIH)NALT1
Genomic and cartography
GoldenPath hg38 (UCSC)NALT1  -     chr9:136547842-136549744 +  9q34.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NALT1  -     9q34.3   [Description]    (hg19-Feb_2009)
GoldenPathNALT1 - 9q34.3 [CytoView hg19]  NALT1 - 9q34.3 [CytoView hg38]
Genome Data Viewer NCBINALT1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK092751 AW449200 DA924831 OA989401
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)NALT1
Gene ExpressionNALT1 [ NCBI-GEO ]   NALT1 [ EBI - ARRAY_EXPRESS ]   NALT1 [ SEEK ]   NALT1 [ MEM ]
Gene Expression Viewer (FireBrowse)NALT1 [ Firebrowse - Broad ]
GenevisibleExpression of NALT1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101928483
GTEX Portal (Tissue expression)NALT1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NALT1
Protein Interaction databases
BioGRIDNALT1
STRING (EMBL)NALT1
ZODIACNALT1
Ontologies - Pathways
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXNALT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:22:01 CEST 2021

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