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NAP1L5 (nucleosome assembly protein 1 like 5)

Identity

Alias_namesnucleosome assembly protein 1-like 5
Alias_symbol (synonym)DRLM
Other alias
HGNC (Hugo) NAP1L5
LocusID (NCBI) 266812
Atlas_Id 41495
Location 4q22.1  [Link to chromosome band 4q22]
Location_base_pair Starts at 88695913 and ends at 88698235 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NAP1L5   19968
LRG (Locus Reference Genomic)LRG_1072
Cards
Entrez_Gene (NCBI)NAP1L5  266812  nucleosome assembly protein 1 like 5
AliasesDRLM
GeneCards (Weizmann)NAP1L5
Ensembl hg19 (Hinxton)ENSG00000177432 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000177432 [Gene_View]  chr4:88695913-88698235 [Contig_View]  NAP1L5 [Vega]
ICGC DataPortalENSG00000177432
TCGA cBioPortalNAP1L5
AceView (NCBI)NAP1L5
Genatlas (Paris)NAP1L5
WikiGenes266812
SOURCE (Princeton)NAP1L5
Genetics Home Reference (NIH)NAP1L5
Genomic and cartography
GoldenPath hg38 (UCSC)NAP1L5  -     chr4:88695913-88698235 -  4q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NAP1L5  -     4q22.1   [Description]    (hg19-Feb_2009)
EnsemblNAP1L5 - 4q22.1 [CytoView hg19]  NAP1L5 - 4q22.1 [CytoView hg38]
Mapping of homologs : NCBINAP1L5 [Mapview hg19]  NAP1L5 [Mapview hg38]
OMIM612203   
Gene and transcription
Genbank (Entrez)AI494339 AK054689 AL834329 BC022544 BC039416
RefSeq transcript (Entrez)NM_153757
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NAP1L5
Cluster EST : UnigeneHs.12554 [ NCBI ]
CGAP (NCI)Hs.12554
Alternative Splicing GalleryENSG00000177432
Gene ExpressionNAP1L5 [ NCBI-GEO ]   NAP1L5 [ EBI - ARRAY_EXPRESS ]   NAP1L5 [ SEEK ]   NAP1L5 [ MEM ]
Gene Expression Viewer (FireBrowse)NAP1L5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)266812
GTEX Portal (Tissue expression)NAP1L5
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96NT1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96NT1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96NT1
Splice isoforms : SwissVarQ96NT1
PhosPhoSitePlusQ96NT1
Domains : Interpro (EBI)NAP_family   
Domain families : Pfam (Sanger)NAP (PF00956)   
Domain families : Pfam (NCBI)pfam00956   
Conserved Domain (NCBI)NAP1L5
DMDM Disease mutations266812
Blocks (Seattle)NAP1L5
SuperfamilyQ96NT1
Human Protein AtlasENSG00000177432
Peptide AtlasQ96NT1
HPRD17626
IPIIPI00070003   IPI01009813   
Protein Interaction databases
DIP (DOE-UCLA)Q96NT1
IntAct (EBI)Q96NT1
FunCoupENSG00000177432
BioGRIDNAP1L5
STRING (EMBL)NAP1L5
ZODIACNAP1L5
Ontologies - Pathways
QuickGOQ96NT1
Ontology : AmiGOnucleus  nucleosome assembly  
Ontology : EGO-EBInucleus  nucleosome assembly  
NDEx NetworkNAP1L5
Atlas of Cancer Signalling NetworkNAP1L5
Wikipedia pathwaysNAP1L5
Orthology - Evolution
OrthoDB266812
GeneTree (enSembl)ENSG00000177432
Phylogenetic Trees/Animal Genes : TreeFamNAP1L5
HOVERGENQ96NT1
HOGENOMQ96NT1
Homologs : HomoloGeneNAP1L5
Homology/Alignments : Family Browser (UCSC)NAP1L5
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNAP1L5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NAP1L5
dbVarNAP1L5
ClinVarNAP1L5
1000_GenomesNAP1L5 
Exome Variant ServerNAP1L5
ExAC (Exome Aggregation Consortium)NAP1L5 (select the gene name)
Genetic variants : HAPMAP266812
Genomic Variants (DGV)NAP1L5 [DGVbeta]
DECIPHERNAP1L5 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNAP1L5 
Mutations
ICGC Data PortalNAP1L5 
TCGA Data PortalNAP1L5 
Broad Tumor PortalNAP1L5
OASIS PortalNAP1L5 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNAP1L5  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNAP1L5
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NAP1L5
DgiDB (Drug Gene Interaction Database)NAP1L5
DoCM (Curated mutations)NAP1L5 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NAP1L5 (select a term)
intoGenNAP1L5
Cancer3DNAP1L5(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612203   
Orphanet
MedgenNAP1L5
Genetic Testing Registry NAP1L5
NextProtQ96NT1 [Medical]
TSGene266812
GENETestsNAP1L5
Target ValidationNAP1L5
Huge Navigator NAP1L5 [HugePedia]
snp3D : Map Gene to Disease266812
BioCentury BCIQNAP1L5
ClinGenNAP1L5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD266812
Chemical/Pharm GKB GenePA134921404
Clinical trialNAP1L5
Miscellaneous
canSAR (ICR)NAP1L5 (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNAP1L5
EVEXNAP1L5
GoPubMedNAP1L5
iHOPNAP1L5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 17:08:39 CEST 2017

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