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NAP1L6 (nucleosome assembly protein 1 like 6)

Identity

Alias_namesnucleosome assembly protein 1-like 6
Alias_symbol (synonym)FLJ33596
Other alias-
HGNC (Hugo) NAP1L6
LocusID (NCBI) 645996
Atlas_Id 46981
Location Xq13.2  [Link to chromosome band Xq13]
Location_base_pair Starts at 72345876 and ends at 72347919 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NAP1L6   31706
Cards
Entrez_Gene (NCBI)NAP1L6  645996  nucleosome assembly protein 1 like 6
Aliases
GeneCards (Weizmann)NAP1L6
Ensembl hg19 (Hinxton)ENSG00000204118 [Gene_View]  chrX:72345876-72347919 [Contig_View]  NAP1L6 [Vega]
Ensembl hg38 (Hinxton)ENSG00000204118 [Gene_View]  chrX:72345876-72347919 [Contig_View]  NAP1L6 [Vega]
ICGC DataPortalENSG00000204118
TCGA cBioPortalNAP1L6
AceView (NCBI)NAP1L6
Genatlas (Paris)NAP1L6
WikiGenes645996
SOURCE (Princeton)NAP1L6
Genetics Home Reference (NIH)NAP1L6
Genomic and cartography
GoldenPath hg19 (UCSC)NAP1L6  -     chrX:72345876-72347919 -  Xq13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)NAP1L6  -     Xq13.2   [Description]    (hg38-Dec_2013)
EnsemblNAP1L6 - Xq13.2 [CytoView hg19]  NAP1L6 - Xq13.2 [CytoView hg38]
Mapping of homologs : NCBINAP1L6 [Mapview hg19]  NAP1L6 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK090915
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000023 NC_018934 NG_021429 NT_011651 NW_004929443
Consensus coding sequences : CCDS (NCBI)NAP1L6
Cluster EST : UnigeneHs.617486 [ NCBI ]
CGAP (NCI)Hs.617486
Alternative Splicing GalleryENSG00000204118
Gene ExpressionNAP1L6 [ NCBI-GEO ]   NAP1L6 [ EBI - ARRAY_EXPRESS ]   NAP1L6 [ SEEK ]   NAP1L6 [ MEM ]
Gene Expression Viewer (FireBrowse)NAP1L6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)645996
GTEX Portal (Tissue expression)NAP1L6
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NFF2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NFF2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NFF2
Splice isoforms : SwissVarA6NFF2
PhosPhoSitePlusA6NFF2
Domains : Interpro (EBI)NAP_family   
Domain families : Pfam (Sanger)NAP (PF00956)   
Domain families : Pfam (NCBI)pfam00956   
Conserved Domain (NCBI)NAP1L6
DMDM Disease mutations645996
Blocks (Seattle)NAP1L6
SuperfamilyA6NFF2
Human Protein AtlasENSG00000204118
Peptide AtlasA6NFF2
IPIIPI00640963   
Protein Interaction databases
DIP (DOE-UCLA)A6NFF2
IntAct (EBI)A6NFF2
FunCoupENSG00000204118
BioGRIDNAP1L6
STRING (EMBL)NAP1L6
ZODIACNAP1L6
Ontologies - Pathways
QuickGOA6NFF2
Ontology : AmiGOnucleus  nucleosome assembly  
Ontology : EGO-EBInucleus  nucleosome assembly  
NDEx NetworkNAP1L6
Atlas of Cancer Signalling NetworkNAP1L6
Wikipedia pathwaysNAP1L6
Orthology - Evolution
OrthoDB645996
GeneTree (enSembl)ENSG00000204118
Phylogenetic Trees/Animal Genes : TreeFamNAP1L6
HOVERGENA6NFF2
HOGENOMA6NFF2
Homologs : HomoloGeneNAP1L6
Homology/Alignments : Family Browser (UCSC)NAP1L6
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNAP1L6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NAP1L6
dbVarNAP1L6
ClinVarNAP1L6
1000_GenomesNAP1L6 
Exome Variant ServerNAP1L6
ExAC (Exome Aggregation Consortium)NAP1L6 (select the gene name)
Genetic variants : HAPMAP645996
Genomic Variants (DGV)NAP1L6 [DGVbeta]
DECIPHER (Syndromes)X:72345876-72347919  ENSG00000204118
CONAN: Copy Number AnalysisNAP1L6 
Mutations
ICGC Data PortalNAP1L6 
TCGA Data PortalNAP1L6 
Broad Tumor PortalNAP1L6
OASIS PortalNAP1L6 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNAP1L6  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNAP1L6
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch NAP1L6
DgiDB (Drug Gene Interaction Database)NAP1L6
DoCM (Curated mutations)NAP1L6 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NAP1L6 (select a term)
intoGenNAP1L6
Cancer3DNAP1L6(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenNAP1L6
Genetic Testing Registry NAP1L6
NextProtA6NFF2 [Medical]
TSGene645996
GENETestsNAP1L6
Huge Navigator NAP1L6 [HugePedia]
snp3D : Map Gene to Disease645996
BioCentury BCIQNAP1L6
ClinGenNAP1L6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD645996
Chemical/Pharm GKB GenePA145148410
Clinical trialNAP1L6
Miscellaneous
canSAR (ICR)NAP1L6 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNAP1L6
EVEXNAP1L6
GoPubMedNAP1L6
iHOPNAP1L6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:18:07 CET 2017

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