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NAPEPLD (N-acyl phosphatidylethanolamine phospholipase D)

Identity

Alias_symbol (synonym)FMP30
C7orf18
NAPE-PLD
Other alias
HGNC (Hugo) NAPEPLD
LocusID (NCBI) 222236
Atlas_Id 70690
Location 7q22.1  [Link to chromosome band 7q22]
Location_base_pair Starts at 102740023 and ends at 102789569 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
HSP90AB1 (6p21.1) / NAPEPLD (7q22.1)NAPEPLD (7q22.1) / TAF2 (8q24.12)SYNE2 (14q23.2) / NAPEPLD (7q22.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NAPEPLD   21683
Cards
Entrez_Gene (NCBI)NAPEPLD  222236  N-acyl phosphatidylethanolamine phospholipase D
AliasesFMP30; NAPE-PLD
GeneCards (Weizmann)NAPEPLD
Ensembl hg19 (Hinxton)ENSG00000161048 [Gene_View]  chr7:102740023-102789569 [Contig_View]  NAPEPLD [Vega]
Ensembl hg38 (Hinxton)ENSG00000161048 [Gene_View]  chr7:102740023-102789569 [Contig_View]  NAPEPLD [Vega]
ICGC DataPortalENSG00000161048
TCGA cBioPortalNAPEPLD
AceView (NCBI)NAPEPLD
Genatlas (Paris)NAPEPLD
WikiGenes222236
SOURCE (Princeton)NAPEPLD
Genetics Home Reference (NIH)NAPEPLD
Genomic and cartography
GoldenPath hg19 (UCSC)NAPEPLD  -     chr7:102740023-102789569 -  7q22.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)NAPEPLD  -     7q22.1   [Description]    (hg38-Dec_2013)
EnsemblNAPEPLD - 7q22.1 [CytoView hg19]  NAPEPLD - 7q22.1 [CytoView hg38]
Mapping of homologs : NCBINAPEPLD [Mapview hg19]  NAPEPLD [Mapview hg38]
OMIM612334   
Gene and transcription
Genbank (Entrez)AB112352 AK000801 AK023244 AK304644 AY357337
RefSeq transcript (Entrez)NM_001122838 NM_198990
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007933 NT_187559 NW_004929332
Consensus coding sequences : CCDS (NCBI)NAPEPLD
Cluster EST : UnigeneHs.324271 [ NCBI ]
CGAP (NCI)Hs.324271
Alternative Splicing GalleryENSG00000161048
Gene ExpressionNAPEPLD [ NCBI-GEO ]   NAPEPLD [ EBI - ARRAY_EXPRESS ]   NAPEPLD [ SEEK ]   NAPEPLD [ MEM ]
Gene Expression Viewer (FireBrowse)NAPEPLD [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)222236
GTEX Portal (Tissue expression)NAPEPLD
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6IQ20   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6IQ20  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6IQ20
Splice isoforms : SwissVarQ6IQ20
PhosPhoSitePlusQ6IQ20
Domains : Interpro (EBI)Beta-lactamas-like    NAPE-PLD   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NAPEPLD
DMDM Disease mutations222236
Blocks (Seattle)NAPEPLD
SuperfamilyQ6IQ20
Human Protein AtlasENSG00000161048
Peptide AtlasQ6IQ20
HPRD14809
IPIIPI00939660   IPI00926276   IPI00926774   IPI00927008   IPI00926314   
Protein Interaction databases
DIP (DOE-UCLA)Q6IQ20
IntAct (EBI)Q6IQ20
FunCoupENSG00000161048
BioGRIDNAPEPLD
STRING (EMBL)NAPEPLD
ZODIACNAPEPLD
Ontologies - Pathways
QuickGOQ6IQ20
Ontology : AmiGOretinoid metabolic process  cytoplasm  phototransduction, visible light  zinc ion binding  phospholipid catabolic process  photoreceptor outer segment membrane  extracellular exosome  N-acylphosphatidylethanolamine-specific phospholipase D activity  
Ontology : EGO-EBIretinoid metabolic process  cytoplasm  phototransduction, visible light  zinc ion binding  phospholipid catabolic process  photoreceptor outer segment membrane  extracellular exosome  N-acylphosphatidylethanolamine-specific phospholipase D activity  
Pathways : KEGGRetrograde endocannabinoid signaling   
NDEx NetworkNAPEPLD
Atlas of Cancer Signalling NetworkNAPEPLD
Wikipedia pathwaysNAPEPLD
Orthology - Evolution
OrthoDB222236
GeneTree (enSembl)ENSG00000161048
Phylogenetic Trees/Animal Genes : TreeFamNAPEPLD
HOVERGENQ6IQ20
HOGENOMQ6IQ20
Homologs : HomoloGeneNAPEPLD
Homology/Alignments : Family Browser (UCSC)NAPEPLD
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNAPEPLD [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NAPEPLD
dbVarNAPEPLD
ClinVarNAPEPLD
1000_GenomesNAPEPLD 
Exome Variant ServerNAPEPLD
ExAC (Exome Aggregation Consortium)NAPEPLD (select the gene name)
Genetic variants : HAPMAP222236
Genomic Variants (DGV)NAPEPLD [DGVbeta]
DECIPHER (Syndromes)7:102740023-102789569  ENSG00000161048
CONAN: Copy Number AnalysisNAPEPLD 
Mutations
ICGC Data PortalNAPEPLD 
TCGA Data PortalNAPEPLD 
Broad Tumor PortalNAPEPLD
OASIS PortalNAPEPLD [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNAPEPLD  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNAPEPLD
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NAPEPLD
DgiDB (Drug Gene Interaction Database)NAPEPLD
DoCM (Curated mutations)NAPEPLD (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NAPEPLD (select a term)
intoGenNAPEPLD
Cancer3DNAPEPLD(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM612334   
Orphanet
MedgenNAPEPLD
Genetic Testing Registry NAPEPLD
NextProtQ6IQ20 [Medical]
TSGene222236
GENETestsNAPEPLD
Huge Navigator NAPEPLD [HugePedia]
snp3D : Map Gene to Disease222236
BioCentury BCIQNAPEPLD
ClinGenNAPEPLD
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD222236
Chemical/Pharm GKB GenePA162396960
Clinical trialNAPEPLD
Miscellaneous
canSAR (ICR)NAPEPLD (select the gene name)
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNAPEPLD
EVEXNAPEPLD
GoPubMedNAPEPLD
iHOPNAPEPLD
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:34:31 CET 2017

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