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NAPG (NSF attachment protein gamma)

Identity

Alias_namesN-ethylmaleimide-sensitive factor attachment protein
Other aliasGAMMASNAP
HGNC (Hugo) NAPG
LocusID (NCBI) 8774
Atlas_Id 56342
Location 18p11.22  [Link to chromosome band 18p11]
Location_base_pair Starts at 10525876 and ends at 10552769 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ARGLU1 (13q33.3) / NAPG (18p11.22)NAPG (18p11.22) / GREB1L (18q11.1)SPRED2 (2p14) / NAPG (18p11.22)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NAPG   7642
Cards
Entrez_Gene (NCBI)NAPG  8774  NSF attachment protein gamma
AliasesGAMMASNAP
GeneCards (Weizmann)NAPG
Ensembl hg19 (Hinxton)ENSG00000134265 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000134265 [Gene_View]  chr18:10525876-10552769 [Contig_View]  NAPG [Vega]
ICGC DataPortalENSG00000134265
TCGA cBioPortalNAPG
AceView (NCBI)NAPG
Genatlas (Paris)NAPG
WikiGenes8774
SOURCE (Princeton)NAPG
Genetics Home Reference (NIH)NAPG
Genomic and cartography
GoldenPath hg38 (UCSC)NAPG  -     chr18:10525876-10552769 +  18p11.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NAPG  -     18p11.22   [Description]    (hg19-Feb_2009)
EnsemblNAPG - 18p11.22 [CytoView hg19]  NAPG - 18p11.22 [CytoView hg38]
Mapping of homologs : NCBINAPG [Mapview hg19]  NAPG [Mapview hg38]
OMIM603216   
Gene and transcription
Genbank (Entrez)AF131752 AK023725 AK126942 AK294038 AK314495
RefSeq transcript (Entrez)NM_003826
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NAPG
Cluster EST : UnigeneHs.464622 [ NCBI ]
CGAP (NCI)Hs.464622
Alternative Splicing GalleryENSG00000134265
Gene ExpressionNAPG [ NCBI-GEO ]   NAPG [ EBI - ARRAY_EXPRESS ]   NAPG [ SEEK ]   NAPG [ MEM ]
Gene Expression Viewer (FireBrowse)NAPG [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8774
GTEX Portal (Tissue expression)NAPG
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ99747   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ99747  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ99747
Splice isoforms : SwissVarQ99747
PhosPhoSitePlusQ99747
Domains : Interpro (EBI)NSF_attach    TPR-like_helical_dom   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NAPG
DMDM Disease mutations8774
Blocks (Seattle)NAPG
SuperfamilyQ99747
Human Protein AtlasENSG00000134265
Peptide AtlasQ99747
HPRD04448
IPIIPI00293817   IPI00643239   
Protein Interaction databases
DIP (DOE-UCLA)Q99747
IntAct (EBI)Q99747
FunCoupENSG00000134265
BioGRIDNAPG
STRING (EMBL)NAPG
ZODIACNAPG
Ontologies - Pathways
QuickGOQ99747
Ontology : AmiGOsoluble NSF attachment protein activity  protein binding  mitochondrion  lysosomal membrane  protein complex assembly  intracellular protein transport  intra-Golgi vesicle-mediated transport  syntaxin binding  SNARE complex  myelin sheath  protein stabilization  membrane fusion  extracellular exosome  
Ontology : EGO-EBIsoluble NSF attachment protein activity  protein binding  mitochondrion  lysosomal membrane  protein complex assembly  intracellular protein transport  intra-Golgi vesicle-mediated transport  syntaxin binding  SNARE complex  myelin sheath  protein stabilization  membrane fusion  extracellular exosome  
NDEx NetworkNAPG
Atlas of Cancer Signalling NetworkNAPG
Wikipedia pathwaysNAPG
Orthology - Evolution
OrthoDB8774
GeneTree (enSembl)ENSG00000134265
Phylogenetic Trees/Animal Genes : TreeFamNAPG
HOVERGENQ99747
HOGENOMQ99747
Homologs : HomoloGeneNAPG
Homology/Alignments : Family Browser (UCSC)NAPG
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNAPG [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NAPG
dbVarNAPG
ClinVarNAPG
1000_GenomesNAPG 
Exome Variant ServerNAPG
ExAC (Exome Aggregation Consortium)NAPG (select the gene name)
Genetic variants : HAPMAP8774
Genomic Variants (DGV)NAPG [DGVbeta]
DECIPHERNAPG [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNAPG 
Mutations
ICGC Data PortalNAPG 
TCGA Data PortalNAPG 
Broad Tumor PortalNAPG
OASIS PortalNAPG [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNAPG  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNAPG
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NAPG
DgiDB (Drug Gene Interaction Database)NAPG
DoCM (Curated mutations)NAPG (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NAPG (select a term)
intoGenNAPG
Cancer3DNAPG(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603216   
Orphanet
MedgenNAPG
Genetic Testing Registry NAPG
NextProtQ99747 [Medical]
TSGene8774
GENETestsNAPG
Target ValidationNAPG
Huge Navigator NAPG [HugePedia]
snp3D : Map Gene to Disease8774
BioCentury BCIQNAPG
ClinGenNAPG
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD8774
Chemical/Pharm GKB GenePA31445
Clinical trialNAPG
Miscellaneous
canSAR (ICR)NAPG (select the gene name)
Probes
Litterature
PubMed34 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNAPG
EVEXNAPG
GoPubMedNAPG
iHOPNAPG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:21:23 CEST 2017

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