Atlas of Genetics and Cytogenetics in Oncology and Haematology

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NAPRT1 (nicotinate phosphoribosyltransferase domain containing 1)

Identity

Other namesPP3856
HGNC (Hugo) NAPRT1
LocusID (NCBI) 93100
Location 8q24.3
Location_base_pair Starts at 144656955 and ends at 144660513 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)NAPRT1   30450
Entrez_Gene (NCBI)NAPRT1  93100  nicotinate phosphoribosyltransferase domain containing 1
Cards
GeneCards (Weizmann)NAPRT1
Ensembl (Hinxton)ENSG00000147813 [Gene_View]  chr8:144656955-144660513 [Contig_View]  NAPRT1 [Vega]
AceView (NCBI)NAPRT1
Genatlas (Paris)NAPRT1
SOURCE (Stanford)NM_145201
Genomic and cartography
GoldenPath (UCSC)NAPRT1  -  8q24.3   chr8:144656955-144660513 -  8q24.3   [Description]    (hg19-Feb_2009)
EnsemblNAPRT1 - 8q24.3 [CytoView]
Mapping of homologs : NCBINAPRT1 [Mapview]
OMIM611552   
Gene and transcription
Genbank (Entrez)AB242230 AF258565 AK097002 AY214325 AY214326
RefSeq transcript (SRS)NM_145201
RefSeq transcript (Entrez)NM_145201
RefSeq genomic (SRS)AC_000140 NC_000008 NC_018919 NT_008046 NW_001839142 NW_004078037
RefSeq genomic (Entrez)AC_000140 NC_000008 NC_018919 NT_008046 NW_001839142 NW_004078037
Consensus coding sequences : CCDS (NCBI)NAPRT1
Cluster EST : UnigeneHs.493164 [ SRS ] Hs.493164 [ NCBI ]
CGAP (NCI)Hs.493164
Alternative Splicing : Fast-db (Paris)GSHG0029930
Alternative Splicing GalleryENSG00000147813
Gene ExpressionNAPRT1 [ NCBI-GEO ]   NAPRT1 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6XQN6 (SRS) Q6XQN6 (Uniprot)
NextProtQ6XQN6
With graphics : InterProQ6XQN6
Splice isoforms : SwissVarQ6XQN6(Swissvar)
Domains : Interpro (SRS)Nic_PRibTrfase-like    Nic_PRibTrfase-rel    Nic_PRibTrfase_put    Quinolinate_PRibosylTrfase_C   
Domains : Interpro (EBI)Nic_PRibTrfase-like    Nic_PRibTrfase-rel    Nic_PRibTrfase_put    Quinolinate_PRibosylTrfase_C   
Related proteins : CluSTrQ6XQN6
Domain families : Pfam (SRS)NAPRTase (PF04095)   
Domain families : Pfam (Sanger)NAPRTase (PF04095)   
Domain families : Pfam (NCBI)pfam04095   
DMDM93100
Blocks (Seattle)Q6XQN6
Human Protein AtlasENSG00000147813
HPRD15161
IPIIPI00465085   IPI00879716   IPI00880164   IPI00952992   IPI00412498   IPI00978154   IPI00978857   
Protein Interaction databases
DIP (DOE-UCLA)Q6XQN6
IntAct (EBI)Q6XQN6
FunCoupENSG00000147813
REACTOMENAPRT1
Protein Interaction Database93100
BioGRIDNAPRT1
InParanoidQ6XQN6
Interologous Interaction database Q6XQN6
IntegromeDBNAPRT1
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)NAPRT1
SNP (GeneSNP Utah)NAPRT1
SNP : HGBaseNAPRT1
Genetic variants : HAPMAPNAPRT1
Somatic Mutations in Cancer : COSMICNAPRT1 
CONAN: Copy Number AnalysisNAPRT1 
Mutations and Diseases : HGMDNAPRT1
OMIM611552   
GENETests611552   
Disease Genetic AssociationNAPRT1
Huge Navigator NAPRT1 [HugePedia]  NAPRT1 [HugeCancerGEM]
Genomic VariantsNAPRT1  NAPRT1 [DGVbeta]
snp3D : Map Gene to Disease93100
General knowledge
Homologs : HomoloGeneNAPRT1
Homology/Alignments : Family Browser (UCSC)NAPRT1
Phylogenetic Trees/Animal Genes : TreeFamNAPRT1
Catalytic activity : Enzyme2.4.2.11 [ Enzyme-Expasy ]   2.4.2.11 [ Enzyme-SRS ]   2.4.2.11 [ IntEnz-EBI ]   2.4.2.11 [ BRENDA ]   2.4.2.11 [ KEGG ]   
Chemical/Protein Interactions : CTD93100
Chemical/Pharm GKB GenePA142671293
Clinical trialNAPRT1
Cancer Resource (Charite)ENSG00000147813
Ontology : AmiGOnicotinate-nucleotide diphosphorylase (carboxylating) activity  nicotinate phosphoribosyltransferase activity  nicotinate phosphoribosyltransferase activity  nucleus  cytoplasm  Golgi apparatus  cytosol  cytosol  vitamin metabolic process  water-soluble vitamin metabolic process  nicotinamide metabolic process  response to oxidative stress  NAD biosynthetic process  nicotinate nucleotide salvage  NAD metabolic process  small molecule metabolic process  
Ontology : EGO-EBInicotinate-nucleotide diphosphorylase (carboxylating) activity  nicotinate phosphoribosyltransferase activity  nicotinate phosphoribosyltransferase activity  nucleus  cytoplasm  Golgi apparatus  cytosol  cytosol  vitamin metabolic process  water-soluble vitamin metabolic process  nicotinamide metabolic process  response to oxidative stress  NAD biosynthetic process  nicotinate nucleotide salvage  NAD metabolic process  small molecule metabolic process  
Other databases
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
PubGeneNAPRT1
iHOPNAPRT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:33:34 CEST 2013
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