Atlas of Genetics and Cytogenetics in Oncology and Haematology


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X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

NARR (nine-amino acid residue-repeats)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 100861437
Atlas_Id 70695
Location 17q11.2  [Link to chromosome band 17q11]
Location_base_pair Starts at 27043011 and ends at 27044908 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)NARR  100861437  nine-amino acid residue-repeats
Aliases
GeneCards (Weizmann)NARR
Ensembl hg19 (Hinxton) [Gene_View]  chr17:27043011-27044908 [Contig_View]  NARR [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:27043011-27044908 [Contig_View]  NARR [Vega]
TCGA cBioPortalNARR
AceView (NCBI)NARR
Genatlas (Paris)NARR
WikiGenes100861437
SOURCE (Princeton)NARR
Genetics Home Reference (NIH)NARR
Genomic and cartography
GoldenPath hg19 (UCSC)NARR  -     chr17:27043011-27044908 -  17q11.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)NARR  -     17q11.2   [Description]    (hg38-Dec_2013)
EnsemblNARR - 17q11.2 [CytoView hg19]  NARR - 17q11.2 [CytoView hg38]
Mapping of homologs : NCBINARR [Mapview hg19]  NARR [Mapview hg38]
Gene and transcription
Genbank (Entrez)CX872465
RefSeq transcript (Entrez)NM_001256281
RefSeq genomic (Entrez)NC_000017 NC_018928 NT_010783 NW_004929407
Consensus coding sequences : CCDS (NCBI)NARR
Cluster EST : UnigeneHs.301853 [ NCBI ]
CGAP (NCI)Hs.301853
Gene ExpressionNARR [ NCBI-GEO ]   NARR [ EBI - ARRAY_EXPRESS ]   NARR [ SEEK ]   NARR [ MEM ]
Gene Expression Viewer (FireBrowse)NARR [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100861437
GTEX Portal (Tissue expression)NARR
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0DI83   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0DI83  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0DI83
Splice isoforms : SwissVarP0DI83
PhosPhoSitePlusP0DI83
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NARR
DMDM Disease mutations100861437
Blocks (Seattle)NARR
SuperfamilyP0DI83
Peptide AtlasP0DI83
Protein Interaction databases
DIP (DOE-UCLA)P0DI83
IntAct (EBI)P0DI83
BioGRIDNARR
STRING (EMBL)NARR
ZODIACNARR
Ontologies - Pathways
QuickGOP0DI83
Ontology : AmiGOnucleolus  
Ontology : EGO-EBInucleolus  
NDEx NetworkNARR
Atlas of Cancer Signalling NetworkNARR
Wikipedia pathwaysNARR
Orthology - Evolution
OrthoDB100861437
Phylogenetic Trees/Animal Genes : TreeFam-
HOVERGENP0DI83
HOGENOMP0DI83
Homologs : HomoloGeneNARR
Homology/Alignments : Family Browser (UCSC)NARR
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNARR [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NARR
dbVarNARR
ClinVarNARR
1000_GenomesNARR 
Exome Variant ServerNARR
ExAC (Exome Aggregation Consortium)NARR (select the gene name)
Genetic variants : HAPMAP100861437
Genomic Variants (DGV)NARR [DGVbeta]
DECIPHER (Syndromes)17:27043011-27044908  
CONAN: Copy Number AnalysisNARR 
Mutations
ICGC Data Portal- 
TCGA Data Portal- 
Broad Tumor Portal-
OASIS Portal- [ Somatic mutations - Copy number]
Mutations and Diseases : HGMD-
BioMutasearch NARR
DgiDB (Drug Gene Interaction Database)NARR
DoCM (Curated mutations)NARR (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NARR (select a term)
intoGenNARR
Cancer3DNARR(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenNARR
Genetic Testing Registry NARR
NextProtP0DI83 [Medical]
TSGene100861437
GENETestsNARR
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease100861437
BioCentury BCIQNARR
ClinGenNARR
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100861437
Clinical trialNARR
Miscellaneous
canSAR (ICR)NARR (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNARR
EVEXNARR
GoPubMedNARR
iHOPNARR
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:34:31 CET 2017

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