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NAT16 (N-acetyltransferase 16 (putative))

Identity

Alias_namesC7orf52
chromosome 7 open reading frame 52
N-acetyltransferase 16 (GCN5-related, putative)
Alias_symbol (synonym)FLJ39237
Other alias
HGNC (Hugo) NAT16
LocusID (NCBI) 375607
Atlas_Id 70699
Location 7q22.1  [Link to chromosome band 7q22]
Location_base_pair Starts at 101170493 and ends at 101180276 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NAT16   22030
Cards
Entrez_Gene (NCBI)NAT16  375607  N-acetyltransferase 16 (putative)
AliasesC7orf52
GeneCards (Weizmann)NAT16
Ensembl hg19 (Hinxton)ENSG00000167011 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000167011 [Gene_View]  chr7:101170493-101180276 [Contig_View]  NAT16 [Vega]
ICGC DataPortalENSG00000167011
TCGA cBioPortalNAT16
AceView (NCBI)NAT16
Genatlas (Paris)NAT16
WikiGenes375607
SOURCE (Princeton)NAT16
Genetics Home Reference (NIH)NAT16
Genomic and cartography
GoldenPath hg38 (UCSC)NAT16  -     chr7:101170493-101180276 -  7q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NAT16  -     7q22.1   [Description]    (hg19-Feb_2009)
EnsemblNAT16 - 7q22.1 [CytoView hg19]  NAT16 - 7q22.1 [CytoView hg38]
Mapping of homologs : NCBINAT16 [Mapview hg19]  NAT16 [Mapview hg38]
OMIM615783   
Gene and transcription
Genbank (Entrez)AK092119 AK096556 AL831911 BC037583 BC104841
RefSeq transcript (Entrez)NM_198571
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NAT16
Cluster EST : UnigeneHs.213044 [ NCBI ]
CGAP (NCI)Hs.213044
Alternative Splicing GalleryENSG00000167011
Gene ExpressionNAT16 [ NCBI-GEO ]   NAT16 [ EBI - ARRAY_EXPRESS ]   NAT16 [ SEEK ]   NAT16 [ MEM ]
Gene Expression Viewer (FireBrowse)NAT16 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)375607
GTEX Portal (Tissue expression)NAT16
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N8M0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N8M0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N8M0
Splice isoforms : SwissVarQ8N8M0
PhosPhoSitePlusQ8N8M0
Domaine pattern : Prosite (Expaxy)GNAT (PS51186)   
Domains : Interpro (EBI)Acyl_CoA_acyltransferase    GNAT_dom   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NAT16
DMDM Disease mutations375607
Blocks (Seattle)NAT16
SuperfamilyQ8N8M0
Human Protein AtlasENSG00000167011
Peptide AtlasQ8N8M0
HPRD13434
IPIIPI00374366   IPI00902716   IPI00924955   
Protein Interaction databases
DIP (DOE-UCLA)Q8N8M0
IntAct (EBI)Q8N8M0
FunCoupENSG00000167011
BioGRIDNAT16
STRING (EMBL)NAT16
ZODIACNAT16
Ontologies - Pathways
QuickGOQ8N8M0
Ontology : AmiGOprotein acetylation  N-acetyltransferase activity  transferase activity, transferring acyl groups other than amino-acyl groups  
Ontology : EGO-EBIprotein acetylation  N-acetyltransferase activity  transferase activity, transferring acyl groups other than amino-acyl groups  
NDEx NetworkNAT16
Atlas of Cancer Signalling NetworkNAT16
Wikipedia pathwaysNAT16
Orthology - Evolution
OrthoDB375607
GeneTree (enSembl)ENSG00000167011
Phylogenetic Trees/Animal Genes : TreeFamNAT16
HOVERGENQ8N8M0
HOGENOMQ8N8M0
Homologs : HomoloGeneNAT16
Homology/Alignments : Family Browser (UCSC)NAT16
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNAT16 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NAT16
dbVarNAT16
ClinVarNAT16
1000_GenomesNAT16 
Exome Variant ServerNAT16
ExAC (Exome Aggregation Consortium)NAT16 (select the gene name)
Genetic variants : HAPMAP375607
Genomic Variants (DGV)NAT16 [DGVbeta]
DECIPHERNAT16 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNAT16 
Mutations
ICGC Data PortalNAT16 
TCGA Data PortalNAT16 
Broad Tumor PortalNAT16
OASIS PortalNAT16 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDNAT16
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NAT16
DgiDB (Drug Gene Interaction Database)NAT16
DoCM (Curated mutations)NAT16 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NAT16 (select a term)
intoGenNAT16
Cancer3DNAT16(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615783   
Orphanet
MedgenNAT16
Genetic Testing Registry NAT16
NextProtQ8N8M0 [Medical]
TSGene375607
GENETestsNAT16
Target ValidationNAT16
Huge Navigator NAT16 [HugePedia]
snp3D : Map Gene to Disease375607
BioCentury BCIQNAT16
ClinGenNAT16
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD375607
Chemical/Pharm GKB GenePA162380580
Clinical trialNAT16
Miscellaneous
canSAR (ICR)NAT16 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNAT16
EVEXNAT16
GoPubMedNAT16
iHOPNAT16
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:32:17 CEST 2017

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