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NAT6 (N-acetyltransferase 6)

Identity

Alias_namesN-acetyltransferase 6
N-acetyltransferase 6 (GCN5-related)
Alias_symbol (synonym)FUS2
Other aliasFUS-2
HGNC (Hugo) NAT6
LocusID (NCBI) 24142
Atlas_Id 40647
Location 3p21.31  [Link to chromosome band 3p21]
Location_base_pair Starts at 50296402 and ends at 50299421 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NAT6   30252
Cards
Entrez_Gene (NCBI)NAT6  24142  N-acetyltransferase 6
AliasesFUS-2; FUS2
GeneCards (Weizmann)NAT6
Ensembl hg19 (Hinxton)ENSG00000243477 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000243477 [Gene_View]  chr3:50296402-50299421 [Contig_View]  NAT6 [Vega]
ICGC DataPortalENSG00000243477
TCGA cBioPortalNAT6
AceView (NCBI)NAT6
Genatlas (Paris)NAT6
WikiGenes24142
SOURCE (Princeton)NAT6
Genetics Home Reference (NIH)NAT6
Genomic and cartography
GoldenPath hg38 (UCSC)NAT6  -     chr3:50296402-50299421 -  3p21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NAT6  -     3p21.31   [Description]    (hg19-Feb_2009)
EnsemblNAT6 - 3p21.31 [CytoView hg19]  NAT6 - 3p21.31 [CytoView hg38]
Mapping of homologs : NCBINAT6 [Mapview hg19]  NAT6 [Mapview hg38]
OMIM607073   
Gene and transcription
Genbank (Entrez)AF040705 AF040706 AK313803 BC004483 BC035689
RefSeq transcript (Entrez)NM_001200016 NM_001200018 NM_012191
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NAT6
Cluster EST : UnigeneHs.736942 [ NCBI ]
CGAP (NCI)Hs.736942
Alternative Splicing GalleryENSG00000243477
Gene ExpressionNAT6 [ NCBI-GEO ]   NAT6 [ EBI - ARRAY_EXPRESS ]   NAT6 [ SEEK ]   NAT6 [ MEM ]
Gene Expression Viewer (FireBrowse)NAT6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)24142
GTEX Portal (Tissue expression)NAT6
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ93015   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ93015  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ93015
Splice isoforms : SwissVarQ93015
Catalytic activity : Enzyme2.3.1.- [ Enzyme-Expasy ]   2.3.1.-2.3.1.- [ IntEnz-EBI ]   2.3.1.- [ BRENDA ]   2.3.1.- [ KEGG ]   
PhosPhoSitePlusQ93015
Domaine pattern : Prosite (Expaxy)GNAT (PS51186)   
Domains : Interpro (EBI)Acyl_CoA_acyltransferase    GNAT_dom   
Domain families : Pfam (Sanger)Acetyltransf_1 (PF00583)   
Domain families : Pfam (NCBI)pfam00583   
Conserved Domain (NCBI)NAT6
DMDM Disease mutations24142
Blocks (Seattle)NAT6
SuperfamilyQ93015
Human Protein AtlasENSG00000243477
Peptide AtlasQ93015
HPRD06148
IPIIPI00016688   IPI00784611   IPI00926535   IPI00926321   IPI00926147   
Protein Interaction databases
DIP (DOE-UCLA)Q93015
IntAct (EBI)Q93015
FunCoupENSG00000243477
BioGRIDNAT6
STRING (EMBL)NAT6
ZODIACNAT6
Ontologies - Pathways
QuickGOQ93015
Ontology : AmiGOcytoplasm  N-acetyltransferase activity  
Ontology : EGO-EBIcytoplasm  N-acetyltransferase activity  
NDEx NetworkNAT6
Atlas of Cancer Signalling NetworkNAT6
Wikipedia pathwaysNAT6
Orthology - Evolution
OrthoDB24142
GeneTree (enSembl)ENSG00000243477
Phylogenetic Trees/Animal Genes : TreeFamNAT6
HOVERGENQ93015
HOGENOMQ93015
Homologs : HomoloGeneNAT6
Homology/Alignments : Family Browser (UCSC)NAT6
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNAT6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NAT6
dbVarNAT6
ClinVarNAT6
1000_GenomesNAT6 
Exome Variant ServerNAT6
ExAC (Exome Aggregation Consortium)NAT6 (select the gene name)
Genetic variants : HAPMAP24142
Genomic Variants (DGV)NAT6 [DGVbeta]
DECIPHERNAT6 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNAT6 
Mutations
ICGC Data PortalNAT6 
TCGA Data PortalNAT6 
Broad Tumor PortalNAT6
OASIS PortalNAT6 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNAT6  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNAT6
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NAT6
DgiDB (Drug Gene Interaction Database)NAT6
DoCM (Curated mutations)NAT6 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NAT6 (select a term)
intoGenNAT6
Cancer3DNAT6(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607073   
Orphanet
MedgenNAT6
Genetic Testing Registry NAT6
NextProtQ93015 [Medical]
TSGene24142
GENETestsNAT6
Target ValidationNAT6
Huge Navigator NAT6 [HugePedia]
snp3D : Map Gene to Disease24142
BioCentury BCIQNAT6
ClinGenNAT6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD24142
Chemical/Pharm GKB GenePA134979782
Clinical trialNAT6
Miscellaneous
canSAR (ICR)NAT6 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNAT6
EVEXNAT6
GoPubMedNAT6
iHOPNAT6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:46:08 CEST 2017

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