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NAT8 (N-acetyltransferase 8 (putative))

Identity

Alias_namesN-acetyltransferase 8
N-acetyltransferase 8 (GCN5-related, putative)
Alias_symbol (synonym)Hcml1
TSC501
GLA
ATase2
Other aliasCCNAT
CML1
TSC510
HGNC (Hugo) NAT8
LocusID (NCBI) 9027
Atlas_Id 55841
Location 2p13.1  [Link to chromosome band 2p13]
Location_base_pair Starts at 73640723 and ends at 73642410 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NAT8   18069
Cards
Entrez_Gene (NCBI)NAT8  9027  N-acetyltransferase 8 (putative)
AliasesATase2; CCNAT; CML1; GLA; 
Hcml1; TSC501; TSC510
GeneCards (Weizmann)NAT8
Ensembl hg19 (Hinxton)ENSG00000144035 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000144035 [Gene_View]  chr2:73640723-73642410 [Contig_View]  NAT8 [Vega]
ICGC DataPortalENSG00000144035
TCGA cBioPortalNAT8
AceView (NCBI)NAT8
Genatlas (Paris)NAT8
WikiGenes9027
SOURCE (Princeton)NAT8
Genetics Home Reference (NIH)NAT8
Genomic and cartography
GoldenPath hg38 (UCSC)NAT8  -     chr2:73640723-73642410 -  2p13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NAT8  -     2p13.1   [Description]    (hg19-Feb_2009)
EnsemblNAT8 - 2p13.1 [CytoView hg19]  NAT8 - 2p13.1 [CytoView hg38]
Mapping of homologs : NCBINAT8 [Mapview hg19]  NAT8 [Mapview hg38]
OMIM606716   
Gene and transcription
Genbank (Entrez)AB013094 AB019551 AF187813 BC012626 BG426653
RefSeq transcript (Entrez)NM_003960
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NAT8
Cluster EST : UnigeneHs.14637 [ NCBI ]
CGAP (NCI)Hs.14637
Alternative Splicing GalleryENSG00000144035
Gene ExpressionNAT8 [ NCBI-GEO ]   NAT8 [ EBI - ARRAY_EXPRESS ]   NAT8 [ SEEK ]   NAT8 [ MEM ]
Gene Expression Viewer (FireBrowse)NAT8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9027
GTEX Portal (Tissue expression)NAT8
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UHE5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UHE5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UHE5
Splice isoforms : SwissVarQ9UHE5
Catalytic activity : Enzyme2.3.1.- [ Enzyme-Expasy ]   2.3.1.-2.3.1.- [ IntEnz-EBI ]   2.3.1.- [ BRENDA ]   2.3.1.- [ KEGG ]   
PhosPhoSitePlusQ9UHE5
Domaine pattern : Prosite (Expaxy)GNAT (PS51186)   
Domains : Interpro (EBI)Acyl_CoA_acyltransferase    GNAT_dom   
Domain families : Pfam (Sanger)Acetyltransf_1 (PF00583)   
Domain families : Pfam (NCBI)pfam00583   
Conserved Domain (NCBI)NAT8
DMDM Disease mutations9027
Blocks (Seattle)NAT8
SuperfamilyQ9UHE5
Human Protein AtlasENSG00000144035
Peptide AtlasQ9UHE5
HPRD08413
IPIIPI00290475   
Protein Interaction databases
DIP (DOE-UCLA)Q9UHE5
IntAct (EBI)Q9UHE5
FunCoupENSG00000144035
BioGRIDNAT8
STRING (EMBL)NAT8
ZODIACNAT8
Ontologies - Pathways
QuickGOQ9UHE5
Ontology : AmiGOlysine N-acetyltransferase activity, acting on acetyl phosphate as donor  lysine N-acetyltransferase activity, acting on acetyl phosphate as donor  protein binding  endoplasmic reticulum  endoplasmic reticulum membrane  endoplasmic reticulum membrane  endoplasmic reticulum-Golgi intermediate compartment  glutathione metabolic process  glutathione metabolic process  positive regulation of gene expression  integral component of membrane  peptidyl-lysine N6-acetylation  endoplasmic reticulum-Golgi intermediate compartment membrane  response to drug  negative regulation of apoptotic process  cellular protein metabolic process  cysteine-S-conjugate N-acetyltransferase activity  beta-amyloid metabolic process  extracellular exosome  
Ontology : EGO-EBIlysine N-acetyltransferase activity, acting on acetyl phosphate as donor  lysine N-acetyltransferase activity, acting on acetyl phosphate as donor  protein binding  endoplasmic reticulum  endoplasmic reticulum membrane  endoplasmic reticulum membrane  endoplasmic reticulum-Golgi intermediate compartment  glutathione metabolic process  glutathione metabolic process  positive regulation of gene expression  integral component of membrane  peptidyl-lysine N6-acetylation  endoplasmic reticulum-Golgi intermediate compartment membrane  response to drug  negative regulation of apoptotic process  cellular protein metabolic process  cysteine-S-conjugate N-acetyltransferase activity  beta-amyloid metabolic process  extracellular exosome  
NDEx NetworkNAT8
Atlas of Cancer Signalling NetworkNAT8
Wikipedia pathwaysNAT8
Orthology - Evolution
OrthoDB9027
GeneTree (enSembl)ENSG00000144035
Phylogenetic Trees/Animal Genes : TreeFamNAT8
HOVERGENQ9UHE5
HOGENOMQ9UHE5
Homologs : HomoloGeneNAT8
Homology/Alignments : Family Browser (UCSC)NAT8
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerNAT8 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)NAT8
dbVarNAT8
ClinVarNAT8
1000_GenomesNAT8 
Exome Variant ServerNAT8
ExAC (Exome Aggregation Consortium)NAT8 (select the gene name)
Genetic variants : HAPMAP9027
Genomic Variants (DGV)NAT8 [DGVbeta]
DECIPHERNAT8 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisNAT8 
Mutations
ICGC Data PortalNAT8 
TCGA Data PortalNAT8 
Broad Tumor PortalNAT8
OASIS PortalNAT8 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICNAT8  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDNAT8
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch NAT8
DgiDB (Drug Gene Interaction Database)NAT8
DoCM (Curated mutations)NAT8 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)NAT8 (select a term)
intoGenNAT8
Cancer3DNAT8(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM606716   
Orphanet
MedgenNAT8
Genetic Testing Registry NAT8
NextProtQ9UHE5 [Medical]
TSGene9027
GENETestsNAT8
Target ValidationNAT8
Huge Navigator NAT8 [HugePedia]
snp3D : Map Gene to Disease9027
BioCentury BCIQNAT8
ClinGenNAT8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9027
Chemical/Pharm GKB GenePA31450
Clinical trialNAT8
Miscellaneous
canSAR (ICR)NAT8 (select the gene name)
Probes
Litterature
PubMed22 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNAT8
EVEXNAT8
GoPubMedNAT8
iHOPNAT8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:46:08 CEST 2017

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