Atlas of Genetics and Cytogenetics in Oncology and Haematology


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NAV2-AS4 (NAV2 antisense RNA 4)

Identity

Alias_namesNAV2 antisense RNA 4 (non-protein coding)
Other alias-
HGNC (Hugo) NAV2-AS4
LocusID (NCBI) 399876
Atlas_Id 70705
Location 11p15.1  [Link to chromosome band 11p15]
Location_base_pair Starts at 19510893 and ends at 19524078 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NAV2-AS4   40741
Cards
Entrez_Gene (NCBI)NAV2-AS4  399876  NAV2 antisense RNA 4
Aliases
GeneCards (Weizmann)NAV2-AS4
Ensembl hg19 (Hinxton)ENSG00000254622 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000254622 [Gene_View]  chr11:19510893-19524078 [Contig_View]  NAV2-AS4 [Vega]
ICGC DataPortalENSG00000254622
TCGA cBioPortalNAV2-AS4
AceView (NCBI)NAV2-AS4
Genatlas (Paris)NAV2-AS4
WikiGenes399876
SOURCE (Princeton)NAV2-AS4
Genetics Home Reference (NIH)NAV2-AS4
Genomic and cartography
GoldenPath hg38 (UCSC)NAV2-AS4  -     chr11:19510893-19524078 -  11p15.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NAV2-AS4  -     11p15.1   [Description]    (hg19-Feb_2009)
EnsemblNAV2-AS4 - 11p15.1 [CytoView hg19]  NAV2-AS4 - 11p15.1 [CytoView hg38]
Mapping of homologs : NCBINAV2-AS4 [Mapview hg19]  NAV2-AS4 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK023501 KX533501
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NAV2-AS4
Cluster EST : UnigeneHs.132600 [ NCBI ]
CGAP (NCI)Hs.132600
Alternative Splicing GalleryENSG00000254622
Gene ExpressionNAV2-AS4 [ NCBI-GEO ]   NAV2-AS4 [ EBI - ARRAY_EXPRESS ]   NAV2-AS4 [ SEEK ]   NAV2-AS4 [ MEM ]
Gene Expression Viewer (FireBrowse)NAV2-AS4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)399876
GTEX Portal (Tissue expression)NAV2-AS4
Human Protein AtlasENSG00000254622-NAV2-AS4 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NAV2-AS4
DMDM Disease mutations399876
Blocks (Seattle)NAV2-AS4
Human Protein Atlas [tissue]ENSG00000254622-NAV2-AS4 [tissue]
Protein Interaction databases
FunCoupENSG00000254622
BioGRIDNAV2-AS4
STRING (EMBL)NAV2-AS4
ZODIACNAV2-AS4
Ontologies - Pathways
Huge Navigator NAV2-AS4 [HugePedia]
snp3D : Map Gene to Disease399876
BioCentury BCIQNAV2-AS4
ClinGenNAV2-AS4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD399876
Clinical trialNAV2-AS4
Miscellaneous
canSAR (ICR)NAV2-AS4 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNAV2-AS4
EVEXNAV2-AS4
GoPubMedNAV2-AS4
iHOPNAV2-AS4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:24:14 CET 2017

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