Atlas of Genetics and Cytogenetics in Oncology and Haematology


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NAV2-AS5 (NAV2 antisense RNA 5)

Identity

Alias_namesNAV2 antisense RNA 5 (non-protein coding)
Other alias-
HGNC (Hugo) NAV2-AS5
LocusID (NCBI) 100874012
Atlas_Id 70706
Location 11p15.1  [Link to chromosome band 11p15]
Location_base_pair Starts at 19502673 and ends at 19507229 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)NAV2-AS5   40740
Cards
Entrez_Gene (NCBI)NAV2-AS5  100874012  NAV2 antisense RNA 5
Aliases
GeneCards (Weizmann)NAV2-AS5
Ensembl hg19 (Hinxton)ENSG00000255043 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000255043 [Gene_View]  chr11:19502673-19507229 [Contig_View]  NAV2-AS5 [Vega]
ICGC DataPortalENSG00000255043
TCGA cBioPortalNAV2-AS5
AceView (NCBI)NAV2-AS5
Genatlas (Paris)NAV2-AS5
WikiGenes100874012
SOURCE (Princeton)NAV2-AS5
Genetics Home Reference (NIH)NAV2-AS5
Genomic and cartography
GoldenPath hg38 (UCSC)NAV2-AS5  -     chr11:19502673-19507229 -  11p15.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)NAV2-AS5  -     11p15.1   [Description]    (hg19-Feb_2009)
EnsemblNAV2-AS5 - 11p15.1 [CytoView hg19]  NAV2-AS5 - 11p15.1 [CytoView hg38]
Mapping of homologs : NCBINAV2-AS5 [Mapview hg19]  NAV2-AS5 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC040220
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)NAV2-AS5
Cluster EST : UnigeneHs.434602 [ NCBI ]
CGAP (NCI)Hs.434602
Alternative Splicing GalleryENSG00000255043
Gene ExpressionNAV2-AS5 [ NCBI-GEO ]   NAV2-AS5 [ EBI - ARRAY_EXPRESS ]   NAV2-AS5 [ SEEK ]   NAV2-AS5 [ MEM ]
Gene Expression Viewer (FireBrowse)NAV2-AS5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874012
GTEX Portal (Tissue expression)NAV2-AS5
Human Protein AtlasENSG00000255043-NAV2-AS5 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)NAV2-AS5
DMDM Disease mutations100874012
Blocks (Seattle)NAV2-AS5
Human Protein Atlas [tissue]ENSG00000255043-NAV2-AS5 [tissue]
Protein Interaction databases
FunCoupENSG00000255043
BioGRIDNAV2-AS5
STRING (EMBL)NAV2-AS5
ZODIACNAV2-AS5
Ontologies - Pathways
Huge Navigator NAV2-AS5 [HugePedia]
snp3D : Map Gene to Disease100874012
BioCentury BCIQNAV2-AS5
ClinGenNAV2-AS5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874012
Clinical trialNAV2-AS5
Miscellaneous
canSAR (ICR)NAV2-AS5 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineNAV2-AS5
EVEXNAV2-AS5
GoPubMedNAV2-AS5
iHOPNAV2-AS5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:24:14 CET 2017

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